Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22723 | 68392;68393;68394 | chr2:178578863;178578862;178578861 | chr2:179443590;179443589;179443588 |
N2AB | 21082 | 63469;63470;63471 | chr2:178578863;178578862;178578861 | chr2:179443590;179443589;179443588 |
N2A | 20155 | 60688;60689;60690 | chr2:178578863;178578862;178578861 | chr2:179443590;179443589;179443588 |
N2B | 13658 | 41197;41198;41199 | chr2:178578863;178578862;178578861 | chr2:179443590;179443589;179443588 |
Novex-1 | 13783 | 41572;41573;41574 | chr2:178578863;178578862;178578861 | chr2:179443590;179443589;179443588 |
Novex-2 | 13850 | 41773;41774;41775 | chr2:178578863;178578862;178578861 | chr2:179443590;179443589;179443588 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | rs2154175020 | None | 0.032 | N | 0.371 | 0.084 | 0.235038932564 | gnomAD-4.0.0 | 4.77791E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 8.32963E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.7269 | likely_pathogenic | 0.8396 | pathogenic | -0.188 | Destabilizing | 0.86 | D | 0.601 | neutral | None | None | None | None | N |
K/C | 0.8597 | likely_pathogenic | 0.914 | pathogenic | -0.31 | Destabilizing | 0.998 | D | 0.702 | prob.neutral | None | None | None | None | N |
K/D | 0.9271 | likely_pathogenic | 0.9613 | pathogenic | 0.169 | Stabilizing | 0.956 | D | 0.542 | neutral | None | None | None | None | N |
K/E | 0.6406 | likely_pathogenic | 0.8148 | pathogenic | 0.194 | Stabilizing | 0.822 | D | 0.536 | neutral | N | 0.455238187 | None | None | N |
K/F | 0.9561 | likely_pathogenic | 0.9723 | pathogenic | -0.372 | Destabilizing | 0.956 | D | 0.653 | neutral | None | None | None | None | N |
K/G | 0.8733 | likely_pathogenic | 0.9239 | pathogenic | -0.405 | Destabilizing | 0.956 | D | 0.514 | neutral | None | None | None | None | N |
K/H | 0.5796 | likely_pathogenic | 0.6455 | pathogenic | -0.7 | Destabilizing | 0.994 | D | 0.527 | neutral | None | None | None | None | N |
K/I | 0.6034 | likely_pathogenic | 0.7151 | pathogenic | 0.311 | Stabilizing | 0.89 | D | 0.651 | neutral | N | 0.486697244 | None | None | N |
K/L | 0.6563 | likely_pathogenic | 0.7603 | pathogenic | 0.311 | Stabilizing | 0.514 | D | 0.585 | neutral | None | None | None | None | N |
K/M | 0.532 | ambiguous | 0.6737 | pathogenic | 0.13 | Stabilizing | 0.559 | D | 0.559 | neutral | None | None | None | None | N |
K/N | 0.833 | likely_pathogenic | 0.9097 | pathogenic | 0.112 | Stabilizing | 0.942 | D | 0.493 | neutral | N | 0.466088866 | None | None | N |
K/P | 0.8602 | likely_pathogenic | 0.9165 | pathogenic | 0.173 | Stabilizing | 0.978 | D | 0.546 | neutral | None | None | None | None | N |
K/Q | 0.3324 | likely_benign | 0.4368 | ambiguous | -0.028 | Destabilizing | 0.942 | D | 0.496 | neutral | N | 0.491409631 | None | None | N |
K/R | 0.0862 | likely_benign | 0.0847 | benign | -0.102 | Destabilizing | 0.032 | N | 0.371 | neutral | N | 0.482963506 | None | None | N |
K/S | 0.8252 | likely_pathogenic | 0.9018 | pathogenic | -0.433 | Destabilizing | 0.86 | D | 0.532 | neutral | None | None | None | None | N |
K/T | 0.4842 | ambiguous | 0.6472 | pathogenic | -0.243 | Destabilizing | 0.942 | D | 0.502 | neutral | N | 0.506781728 | None | None | N |
K/V | 0.6314 | likely_pathogenic | 0.7103 | pathogenic | 0.173 | Stabilizing | 0.754 | D | 0.531 | neutral | None | None | None | None | N |
K/W | 0.9358 | likely_pathogenic | 0.9533 | pathogenic | -0.358 | Destabilizing | 0.998 | D | 0.724 | prob.delet. | None | None | None | None | N |
K/Y | 0.8811 | likely_pathogenic | 0.915 | pathogenic | -0.012 | Destabilizing | 0.978 | D | 0.627 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.