Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22735 | 68428;68429;68430 | chr2:178578827;178578826;178578825 | chr2:179443554;179443553;179443552 |
N2AB | 21094 | 63505;63506;63507 | chr2:178578827;178578826;178578825 | chr2:179443554;179443553;179443552 |
N2A | 20167 | 60724;60725;60726 | chr2:178578827;178578826;178578825 | chr2:179443554;179443553;179443552 |
N2B | 13670 | 41233;41234;41235 | chr2:178578827;178578826;178578825 | chr2:179443554;179443553;179443552 |
Novex-1 | 13795 | 41608;41609;41610 | chr2:178578827;178578826;178578825 | chr2:179443554;179443553;179443552 |
Novex-2 | 13862 | 41809;41810;41811 | chr2:178578827;178578826;178578825 | chr2:179443554;179443553;179443552 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/F | rs2154174995 | None | 0.314 | N | 0.508 | 0.182 | 0.480349945188 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 4.78927E-04 |
I/F | rs2154174995 | None | 0.314 | N | 0.508 | 0.182 | 0.480349945188 | gnomAD-4.0.0 | 6.57099E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 4.73934E-04 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.2498 | likely_benign | 0.1389 | benign | -2.096 | Highly Destabilizing | 0.034 | N | 0.521 | neutral | None | None | None | None | N |
I/C | 0.5384 | ambiguous | 0.4611 | ambiguous | -1.335 | Destabilizing | 0.823 | D | 0.593 | neutral | None | None | None | None | N |
I/D | 0.9044 | likely_pathogenic | 0.7393 | pathogenic | -1.929 | Destabilizing | 0.552 | D | 0.795 | deleterious | None | None | None | None | N |
I/E | 0.7111 | likely_pathogenic | 0.4801 | ambiguous | -1.74 | Destabilizing | 0.552 | D | 0.779 | deleterious | None | None | None | None | N |
I/F | 0.2175 | likely_benign | 0.1406 | benign | -1.221 | Destabilizing | 0.314 | N | 0.508 | neutral | N | 0.466124864 | None | None | N |
I/G | 0.7571 | likely_pathogenic | 0.5375 | ambiguous | -2.576 | Highly Destabilizing | 0.552 | D | 0.751 | deleterious | None | None | None | None | N |
I/H | 0.6309 | likely_pathogenic | 0.4545 | ambiguous | -1.681 | Destabilizing | 0.934 | D | 0.816 | deleterious | None | None | None | None | N |
I/K | 0.448 | ambiguous | 0.3027 | benign | -1.499 | Destabilizing | 0.552 | D | 0.777 | deleterious | None | None | None | None | N |
I/L | 0.1133 | likely_benign | 0.0956 | benign | -0.742 | Destabilizing | 0.012 | N | 0.327 | neutral | N | 0.513358197 | None | None | N |
I/M | 0.0892 | likely_benign | 0.0733 | benign | -0.676 | Destabilizing | 0.314 | N | 0.53 | neutral | N | 0.495391298 | None | None | N |
I/N | 0.6061 | likely_pathogenic | 0.3833 | ambiguous | -1.779 | Destabilizing | 0.739 | D | 0.809 | deleterious | N | 0.503093843 | None | None | N |
I/P | 0.9634 | likely_pathogenic | 0.9037 | pathogenic | -1.172 | Destabilizing | 0.552 | D | 0.798 | deleterious | None | None | None | None | N |
I/Q | 0.5053 | ambiguous | 0.3429 | ambiguous | -1.694 | Destabilizing | 0.789 | D | 0.811 | deleterious | None | None | None | None | N |
I/R | 0.3727 | ambiguous | 0.2369 | benign | -1.167 | Destabilizing | 0.552 | D | 0.808 | deleterious | None | None | None | None | N |
I/S | 0.4102 | ambiguous | 0.2349 | benign | -2.48 | Highly Destabilizing | 0.314 | N | 0.708 | prob.delet. | N | 0.488531079 | None | None | N |
I/T | 0.1591 | likely_benign | 0.0881 | benign | -2.139 | Highly Destabilizing | 0.061 | N | 0.591 | neutral | N | 0.474314391 | None | None | N |
I/V | 0.05 | likely_benign | 0.0478 | benign | -1.172 | Destabilizing | None | N | 0.149 | neutral | N | 0.408537531 | None | None | N |
I/W | 0.8584 | likely_pathogenic | 0.7469 | pathogenic | -1.438 | Destabilizing | 0.934 | D | 0.808 | deleterious | None | None | None | None | N |
I/Y | 0.6422 | likely_pathogenic | 0.5103 | ambiguous | -1.145 | Destabilizing | 0.552 | D | 0.593 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.