Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22768 | 68527;68528;68529 | chr2:178578638;178578637;178578636 | chr2:179443365;179443364;179443363 |
N2AB | 21127 | 63604;63605;63606 | chr2:178578638;178578637;178578636 | chr2:179443365;179443364;179443363 |
N2A | 20200 | 60823;60824;60825 | chr2:178578638;178578637;178578636 | chr2:179443365;179443364;179443363 |
N2B | 13703 | 41332;41333;41334 | chr2:178578638;178578637;178578636 | chr2:179443365;179443364;179443363 |
Novex-1 | 13828 | 41707;41708;41709 | chr2:178578638;178578637;178578636 | chr2:179443365;179443364;179443363 |
Novex-2 | 13895 | 41908;41909;41910 | chr2:178578638;178578637;178578636 | chr2:179443365;179443364;179443363 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | None | None | 0.002 | N | 0.303 | 0.076 | 0.107399877778 | gnomAD-4.0.0 | 6.85087E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.16371E-05 | 0 |
K/R | rs761210578 | 0.203 | None | N | 0.161 | 0.112 | 0.0551355673512 | gnomAD-2.1.1 | 7.19E-06 | None | None | None | None | I | None | 8.3E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
K/R | rs761210578 | 0.203 | None | N | 0.161 | 0.112 | 0.0551355673512 | gnomAD-3.1.2 | 3.29E-05 | None | None | None | None | I | None | 1.20645E-04 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
K/R | rs761210578 | 0.203 | None | N | 0.161 | 0.112 | 0.0551355673512 | gnomAD-4.0.0 | 5.58341E-06 | None | None | None | None | I | None | 1.06886E-04 | 0 | None | 0 | 0 | None | 0 | 0 | 8.48194E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.2777 | likely_benign | 0.2476 | benign | 0.077 | Stabilizing | 0.002 | N | 0.231 | neutral | None | None | None | None | I |
K/C | 0.5567 | ambiguous | 0.473 | ambiguous | -0.254 | Destabilizing | 0.935 | D | 0.289 | neutral | None | None | None | None | I |
K/D | 0.5485 | ambiguous | 0.5128 | ambiguous | -0.075 | Destabilizing | 0.001 | N | 0.238 | neutral | None | None | None | None | I |
K/E | 0.1873 | likely_benign | 0.1721 | benign | -0.07 | Destabilizing | 0.027 | N | 0.369 | neutral | N | 0.433324119 | None | None | I |
K/F | 0.6887 | likely_pathogenic | 0.6283 | pathogenic | -0.124 | Destabilizing | 0.555 | D | 0.329 | neutral | None | None | None | None | I |
K/G | 0.3125 | likely_benign | 0.2544 | benign | -0.107 | Destabilizing | 0.067 | N | 0.364 | neutral | None | None | None | None | I |
K/H | 0.2758 | likely_benign | 0.2372 | benign | -0.273 | Destabilizing | 0.555 | D | 0.349 | neutral | None | None | None | None | I |
K/I | 0.309 | likely_benign | 0.2886 | benign | 0.483 | Stabilizing | 0.555 | D | 0.371 | neutral | None | None | None | None | I |
K/L | 0.2824 | likely_benign | 0.2493 | benign | 0.483 | Stabilizing | 0.149 | N | 0.463 | neutral | None | None | None | None | I |
K/M | 0.2495 | likely_benign | 0.2331 | benign | 0.12 | Stabilizing | 0.741 | D | 0.341 | neutral | N | 0.487006675 | None | None | I |
K/N | 0.4287 | ambiguous | 0.4021 | ambiguous | 0.194 | Stabilizing | 0.002 | N | 0.303 | neutral | N | 0.462975023 | None | None | I |
K/P | 0.4493 | ambiguous | 0.4163 | ambiguous | 0.374 | Stabilizing | 0.555 | D | 0.385 | neutral | None | None | None | None | I |
K/Q | 0.1187 | likely_benign | 0.1068 | benign | 0.041 | Stabilizing | 0.062 | N | 0.371 | neutral | N | 0.455528975 | None | None | I |
K/R | 0.063 | likely_benign | 0.0567 | benign | -0.025 | Destabilizing | None | N | 0.161 | neutral | N | 0.459145284 | None | None | I |
K/S | 0.3704 | ambiguous | 0.333 | benign | -0.227 | Destabilizing | 0.035 | N | 0.339 | neutral | None | None | None | None | I |
K/T | 0.2043 | likely_benign | 0.197 | benign | -0.085 | Destabilizing | 0.117 | N | 0.436 | neutral | N | 0.426918222 | None | None | I |
K/V | 0.2656 | likely_benign | 0.2396 | benign | 0.374 | Stabilizing | 0.149 | N | 0.441 | neutral | None | None | None | None | I |
K/W | 0.5866 | likely_pathogenic | 0.4637 | ambiguous | -0.18 | Destabilizing | 0.935 | D | 0.37 | neutral | None | None | None | None | I |
K/Y | 0.5412 | ambiguous | 0.478 | ambiguous | 0.168 | Stabilizing | 0.555 | D | 0.361 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.