Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22776 | 68551;68552;68553 | chr2:178578614;178578613;178578612 | chr2:179443341;179443340;179443339 |
N2AB | 21135 | 63628;63629;63630 | chr2:178578614;178578613;178578612 | chr2:179443341;179443340;179443339 |
N2A | 20208 | 60847;60848;60849 | chr2:178578614;178578613;178578612 | chr2:179443341;179443340;179443339 |
N2B | 13711 | 41356;41357;41358 | chr2:178578614;178578613;178578612 | chr2:179443341;179443340;179443339 |
Novex-1 | 13836 | 41731;41732;41733 | chr2:178578614;178578613;178578612 | chr2:179443341;179443340;179443339 |
Novex-2 | 13903 | 41932;41933;41934 | chr2:178578614;178578613;178578612 | chr2:179443341;179443340;179443339 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs1347609224 | None | 1.0 | N | 0.841 | 0.459 | 0.366848117066 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
T/I | rs1347609224 | None | 1.0 | N | 0.841 | 0.459 | 0.366848117066 | gnomAD-4.0.0 | 6.57782E-06 | None | None | None | None | I | None | 2.41464E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
T/R | None | None | 1.0 | N | 0.842 | 0.47 | 0.463843524616 | gnomAD-4.0.0 | 1.20373E-06 | None | None | None | None | I | None | 0 | 1.01833E-03 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1778 | likely_benign | 0.1587 | benign | -0.568 | Destabilizing | 0.999 | D | 0.569 | neutral | N | 0.482893355 | None | None | I |
T/C | 0.5476 | ambiguous | 0.526 | ambiguous | -0.357 | Destabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | I |
T/D | 0.8178 | likely_pathogenic | 0.817 | pathogenic | 0.267 | Stabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | I |
T/E | 0.6848 | likely_pathogenic | 0.6852 | pathogenic | 0.259 | Stabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | I |
T/F | 0.4206 | ambiguous | 0.4065 | ambiguous | -0.683 | Destabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | I |
T/G | 0.5076 | ambiguous | 0.4514 | ambiguous | -0.806 | Destabilizing | 1.0 | D | 0.762 | deleterious | None | None | None | None | I |
T/H | 0.5258 | ambiguous | 0.5233 | ambiguous | -1.044 | Destabilizing | 1.0 | D | 0.796 | deleterious | None | None | None | None | I |
T/I | 0.1934 | likely_benign | 0.1876 | benign | -0.037 | Destabilizing | 1.0 | D | 0.841 | deleterious | N | 0.444794694 | None | None | I |
T/K | 0.513 | ambiguous | 0.5385 | ambiguous | -0.517 | Destabilizing | 1.0 | D | 0.843 | deleterious | N | 0.489084188 | None | None | I |
T/L | 0.1101 | likely_benign | 0.1105 | benign | -0.037 | Destabilizing | 0.999 | D | 0.729 | prob.delet. | None | None | None | None | I |
T/M | 0.1011 | likely_benign | 0.0981 | benign | 0.06 | Stabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | I |
T/N | 0.3058 | likely_benign | 0.2879 | benign | -0.412 | Destabilizing | 1.0 | D | 0.762 | deleterious | None | None | None | None | I |
T/P | 0.7472 | likely_pathogenic | 0.7189 | pathogenic | -0.182 | Destabilizing | 1.0 | D | 0.839 | deleterious | N | 0.520876292 | None | None | I |
T/Q | 0.4372 | ambiguous | 0.4299 | ambiguous | -0.524 | Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | I |
T/R | 0.4522 | ambiguous | 0.4821 | ambiguous | -0.339 | Destabilizing | 1.0 | D | 0.842 | deleterious | N | 0.520311173 | None | None | I |
T/S | 0.2058 | likely_benign | 0.1806 | benign | -0.706 | Destabilizing | 0.999 | D | 0.566 | neutral | N | 0.503552209 | None | None | I |
T/V | 0.1591 | likely_benign | 0.1525 | benign | -0.182 | Destabilizing | 0.999 | D | 0.644 | neutral | None | None | None | None | I |
T/W | 0.7967 | likely_pathogenic | 0.8027 | pathogenic | -0.658 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | I |
T/Y | 0.538 | ambiguous | 0.5403 | ambiguous | -0.407 | Destabilizing | 1.0 | D | 0.85 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.