Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22823 | 68692;68693;68694 | chr2:178578048;178578047;178578046 | chr2:179442775;179442774;179442773 |
N2AB | 21182 | 63769;63770;63771 | chr2:178578048;178578047;178578046 | chr2:179442775;179442774;179442773 |
N2A | 20255 | 60988;60989;60990 | chr2:178578048;178578047;178578046 | chr2:179442775;179442774;179442773 |
N2B | 13758 | 41497;41498;41499 | chr2:178578048;178578047;178578046 | chr2:179442775;179442774;179442773 |
Novex-1 | 13883 | 41872;41873;41874 | chr2:178578048;178578047;178578046 | chr2:179442775;179442774;179442773 |
Novex-2 | 13950 | 42073;42074;42075 | chr2:178578048;178578047;178578046 | chr2:179442775;179442774;179442773 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/S | rs770040120 | -0.127 | 0.669 | N | 0.573 | 0.334 | 0.628610474668 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.92E-06 | 0 |
L/S | rs770040120 | -0.127 | 0.669 | N | 0.573 | 0.334 | 0.628610474668 | gnomAD-4.0.0 | 1.59253E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86041E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.2078 | likely_benign | 0.1984 | benign | -0.38 | Destabilizing | 0.067 | N | 0.259 | neutral | None | None | None | None | I |
L/C | 0.6285 | likely_pathogenic | 0.6281 | pathogenic | -0.635 | Destabilizing | 0.998 | D | 0.476 | neutral | None | None | None | None | I |
L/D | 0.7831 | likely_pathogenic | 0.7948 | pathogenic | -0.105 | Destabilizing | 0.991 | D | 0.591 | neutral | None | None | None | None | I |
L/E | 0.4731 | ambiguous | 0.4955 | ambiguous | -0.213 | Destabilizing | 0.974 | D | 0.569 | neutral | None | None | None | None | I |
L/F | 0.2054 | likely_benign | 0.2082 | benign | -0.583 | Destabilizing | 0.934 | D | 0.403 | neutral | N | 0.470608316 | None | None | I |
L/G | 0.5771 | likely_pathogenic | 0.5797 | pathogenic | -0.489 | Destabilizing | 0.842 | D | 0.557 | neutral | None | None | None | None | I |
L/H | 0.2858 | likely_benign | 0.3114 | benign | 0.072 | Stabilizing | 0.998 | D | 0.581 | neutral | None | None | None | None | I |
L/I | 0.0975 | likely_benign | 0.1018 | benign | -0.228 | Destabilizing | 0.454 | N | 0.415 | neutral | N | 0.37227566 | None | None | I |
L/K | 0.3108 | likely_benign | 0.3631 | ambiguous | -0.181 | Destabilizing | 0.949 | D | 0.519 | neutral | None | None | None | None | I |
L/M | 0.0944 | likely_benign | 0.0863 | benign | -0.348 | Destabilizing | 0.172 | N | 0.308 | neutral | None | None | None | None | I |
L/N | 0.4463 | ambiguous | 0.4337 | ambiguous | -0.015 | Destabilizing | 0.991 | D | 0.59 | neutral | None | None | None | None | I |
L/P | 0.5102 | ambiguous | 0.5837 | pathogenic | -0.248 | Destabilizing | 0.991 | D | 0.597 | neutral | None | None | None | None | I |
L/Q | 0.1769 | likely_benign | 0.1831 | benign | -0.231 | Destabilizing | 0.974 | D | 0.588 | neutral | None | None | None | None | I |
L/R | 0.2587 | likely_benign | 0.3157 | benign | 0.302 | Stabilizing | 0.974 | D | 0.594 | neutral | None | None | None | None | I |
L/S | 0.3038 | likely_benign | 0.2913 | benign | -0.411 | Destabilizing | 0.669 | D | 0.573 | neutral | N | 0.394323014 | None | None | I |
L/T | 0.2285 | likely_benign | 0.2301 | benign | -0.413 | Destabilizing | 0.842 | D | 0.546 | neutral | None | None | None | None | I |
L/V | 0.0955 | likely_benign | 0.0969 | benign | -0.248 | Destabilizing | 0.051 | N | 0.227 | neutral | N | 0.440634094 | None | None | I |
L/W | 0.3707 | ambiguous | 0.4209 | ambiguous | -0.611 | Destabilizing | 0.998 | D | 0.637 | neutral | None | None | None | None | I |
L/Y | 0.4073 | ambiguous | 0.4211 | ambiguous | -0.341 | Destabilizing | 0.974 | D | 0.485 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.