Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC2282368692;68693;68694 chr2:178578048;178578047;178578046chr2:179442775;179442774;179442773
N2AB2118263769;63770;63771 chr2:178578048;178578047;178578046chr2:179442775;179442774;179442773
N2A2025560988;60989;60990 chr2:178578048;178578047;178578046chr2:179442775;179442774;179442773
N2B1375841497;41498;41499 chr2:178578048;178578047;178578046chr2:179442775;179442774;179442773
Novex-11388341872;41873;41874 chr2:178578048;178578047;178578046chr2:179442775;179442774;179442773
Novex-21395042073;42074;42075 chr2:178578048;178578047;178578046chr2:179442775;179442774;179442773
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: L
  • RefSeq wild type transcript codon: TTA
  • RefSeq wild type template codon: AAT
  • Domain: Fn3-53
  • Domain position: 81
  • Structural Position: 113
  • Q(SASA): 0.9486
  • Predicted PPI site: I

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
L/S rs770040120 -0.127 0.669 N 0.573 0.334 0.628610474668 gnomAD-2.1.1 4.03E-06 None None None None I None 0 0 None 0 0 None 0 None 0 8.92E-06 0
L/S rs770040120 -0.127 0.669 N 0.573 0.334 0.628610474668 gnomAD-4.0.0 1.59253E-06 None None None None I None 0 0 None 0 0 None 0 0 2.86041E-06 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
L/A 0.2078 likely_benign 0.1984 benign -0.38 Destabilizing 0.067 N 0.259 neutral None None None None I
L/C 0.6285 likely_pathogenic 0.6281 pathogenic -0.635 Destabilizing 0.998 D 0.476 neutral None None None None I
L/D 0.7831 likely_pathogenic 0.7948 pathogenic -0.105 Destabilizing 0.991 D 0.591 neutral None None None None I
L/E 0.4731 ambiguous 0.4955 ambiguous -0.213 Destabilizing 0.974 D 0.569 neutral None None None None I
L/F 0.2054 likely_benign 0.2082 benign -0.583 Destabilizing 0.934 D 0.403 neutral N 0.470608316 None None I
L/G 0.5771 likely_pathogenic 0.5797 pathogenic -0.489 Destabilizing 0.842 D 0.557 neutral None None None None I
L/H 0.2858 likely_benign 0.3114 benign 0.072 Stabilizing 0.998 D 0.581 neutral None None None None I
L/I 0.0975 likely_benign 0.1018 benign -0.228 Destabilizing 0.454 N 0.415 neutral N 0.37227566 None None I
L/K 0.3108 likely_benign 0.3631 ambiguous -0.181 Destabilizing 0.949 D 0.519 neutral None None None None I
L/M 0.0944 likely_benign 0.0863 benign -0.348 Destabilizing 0.172 N 0.308 neutral None None None None I
L/N 0.4463 ambiguous 0.4337 ambiguous -0.015 Destabilizing 0.991 D 0.59 neutral None None None None I
L/P 0.5102 ambiguous 0.5837 pathogenic -0.248 Destabilizing 0.991 D 0.597 neutral None None None None I
L/Q 0.1769 likely_benign 0.1831 benign -0.231 Destabilizing 0.974 D 0.588 neutral None None None None I
L/R 0.2587 likely_benign 0.3157 benign 0.302 Stabilizing 0.974 D 0.594 neutral None None None None I
L/S 0.3038 likely_benign 0.2913 benign -0.411 Destabilizing 0.669 D 0.573 neutral N 0.394323014 None None I
L/T 0.2285 likely_benign 0.2301 benign -0.413 Destabilizing 0.842 D 0.546 neutral None None None None I
L/V 0.0955 likely_benign 0.0969 benign -0.248 Destabilizing 0.051 N 0.227 neutral N 0.440634094 None None I
L/W 0.3707 ambiguous 0.4209 ambiguous -0.611 Destabilizing 0.998 D 0.637 neutral None None None None I
L/Y 0.4073 ambiguous 0.4211 ambiguous -0.341 Destabilizing 0.974 D 0.485 neutral None None None None I

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.