Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22832 | 68719;68720;68721 | chr2:178578021;178578020;178578019 | chr2:179442748;179442747;179442746 |
N2AB | 21191 | 63796;63797;63798 | chr2:178578021;178578020;178578019 | chr2:179442748;179442747;179442746 |
N2A | 20264 | 61015;61016;61017 | chr2:178578021;178578020;178578019 | chr2:179442748;179442747;179442746 |
N2B | 13767 | 41524;41525;41526 | chr2:178578021;178578020;178578019 | chr2:179442748;179442747;179442746 |
Novex-1 | 13892 | 41899;41900;41901 | chr2:178578021;178578020;178578019 | chr2:179442748;179442747;179442746 |
Novex-2 | 13959 | 42100;42101;42102 | chr2:178578021;178578020;178578019 | chr2:179442748;179442747;179442746 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/S | None | None | 0.851 | N | 0.641 | 0.209 | 0.27479166964 | gnomAD-4.0.0 | 1.36896E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99703E-07 | 1.16007E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.088 | likely_benign | 0.0836 | benign | -1.695 | Destabilizing | 0.824 | D | 0.589 | neutral | N | 0.481960641 | None | None | N |
P/C | 0.5497 | ambiguous | 0.529 | ambiguous | -1.052 | Destabilizing | 0.999 | D | 0.829 | deleterious | None | None | None | None | N |
P/D | 0.8743 | likely_pathogenic | 0.8681 | pathogenic | -1.4 | Destabilizing | 0.991 | D | 0.643 | neutral | None | None | None | None | N |
P/E | 0.6685 | likely_pathogenic | 0.6467 | pathogenic | -1.368 | Destabilizing | 0.968 | D | 0.636 | neutral | None | None | None | None | N |
P/F | 0.7383 | likely_pathogenic | 0.7057 | pathogenic | -1.272 | Destabilizing | 0.991 | D | 0.82 | deleterious | None | None | None | None | N |
P/G | 0.5176 | ambiguous | 0.4804 | ambiguous | -2.047 | Highly Destabilizing | 0.968 | D | 0.655 | prob.neutral | None | None | None | None | N |
P/H | 0.4815 | ambiguous | 0.4495 | ambiguous | -1.546 | Destabilizing | 0.999 | D | 0.751 | deleterious | None | None | None | None | N |
P/I | 0.3775 | ambiguous | 0.3758 | ambiguous | -0.811 | Destabilizing | 0.883 | D | 0.73 | deleterious | None | None | None | None | N |
P/K | 0.6968 | likely_pathogenic | 0.6671 | pathogenic | -1.258 | Destabilizing | 0.938 | D | 0.637 | neutral | None | None | None | None | N |
P/L | 0.2262 | likely_benign | 0.2158 | benign | -0.811 | Destabilizing | 0.851 | D | 0.69 | prob.delet. | N | 0.463781007 | None | None | N |
P/M | 0.4887 | ambiguous | 0.4609 | ambiguous | -0.607 | Destabilizing | 0.991 | D | 0.75 | deleterious | None | None | None | None | N |
P/N | 0.6613 | likely_pathogenic | 0.642 | pathogenic | -1.08 | Destabilizing | 0.991 | D | 0.633 | neutral | None | None | None | None | N |
P/Q | 0.3813 | ambiguous | 0.3457 | ambiguous | -1.223 | Destabilizing | 0.996 | D | 0.69 | prob.delet. | N | 0.501448002 | None | None | N |
P/R | 0.5283 | ambiguous | 0.4934 | ambiguous | -0.774 | Destabilizing | 0.988 | D | 0.712 | prob.delet. | N | 0.509588303 | None | None | N |
P/S | 0.2091 | likely_benign | 0.1895 | benign | -1.668 | Destabilizing | 0.851 | D | 0.641 | neutral | N | 0.473682508 | None | None | N |
P/T | 0.1778 | likely_benign | 0.1716 | benign | -1.523 | Destabilizing | 0.132 | N | 0.421 | neutral | N | 0.511859474 | None | None | N |
P/V | 0.2373 | likely_benign | 0.2395 | benign | -1.072 | Destabilizing | 0.078 | N | 0.511 | neutral | None | None | None | None | N |
P/W | 0.8872 | likely_pathogenic | 0.8663 | pathogenic | -1.476 | Destabilizing | 0.999 | D | 0.824 | deleterious | None | None | None | None | N |
P/Y | 0.7641 | likely_pathogenic | 0.7446 | pathogenic | -1.182 | Destabilizing | 0.997 | D | 0.817 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.