Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22851 | 68776;68777;68778 | chr2:178577875;178577874;178577873 | chr2:179442602;179442601;179442600 |
N2AB | 21210 | 63853;63854;63855 | chr2:178577875;178577874;178577873 | chr2:179442602;179442601;179442600 |
N2A | 20283 | 61072;61073;61074 | chr2:178577875;178577874;178577873 | chr2:179442602;179442601;179442600 |
N2B | 13786 | 41581;41582;41583 | chr2:178577875;178577874;178577873 | chr2:179442602;179442601;179442600 |
Novex-1 | 13911 | 41956;41957;41958 | chr2:178577875;178577874;178577873 | chr2:179442602;179442601;179442600 |
Novex-2 | 13978 | 42157;42158;42159 | chr2:178577875;178577874;178577873 | chr2:179442602;179442601;179442600 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | None | None | 0.892 | N | 0.625 | 0.34 | 0.659639129211 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
I/V | None | None | 0.011 | N | 0.184 | 0.083 | 0.406945738958 | gnomAD-4.0.0 | 1.66115E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.13952E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.4728 | ambiguous | 0.5512 | ambiguous | -0.849 | Destabilizing | 0.845 | D | 0.542 | neutral | None | None | None | None | N |
I/C | 0.6968 | likely_pathogenic | 0.7589 | pathogenic | -0.77 | Destabilizing | 0.999 | D | 0.649 | neutral | None | None | None | None | N |
I/D | 0.8462 | likely_pathogenic | 0.8809 | pathogenic | -0.316 | Destabilizing | 0.996 | D | 0.733 | prob.delet. | None | None | None | None | N |
I/E | 0.6686 | likely_pathogenic | 0.7381 | pathogenic | -0.381 | Destabilizing | 0.987 | D | 0.733 | prob.delet. | None | None | None | None | N |
I/F | 0.2221 | likely_benign | 0.258 | benign | -0.674 | Destabilizing | 0.967 | D | 0.581 | neutral | N | 0.47106607 | None | None | N |
I/G | 0.7504 | likely_pathogenic | 0.8075 | pathogenic | -1.05 | Destabilizing | 0.987 | D | 0.728 | prob.delet. | None | None | None | None | N |
I/H | 0.635 | likely_pathogenic | 0.7022 | pathogenic | -0.2 | Destabilizing | 0.999 | D | 0.713 | prob.delet. | None | None | None | None | N |
I/K | 0.4637 | ambiguous | 0.5273 | ambiguous | -0.549 | Destabilizing | 0.987 | D | 0.731 | prob.delet. | None | None | None | None | N |
I/L | 0.1188 | likely_benign | 0.1308 | benign | -0.424 | Destabilizing | 0.426 | N | 0.255 | neutral | N | 0.411775411 | None | None | N |
I/M | 0.1014 | likely_benign | 0.1122 | benign | -0.491 | Destabilizing | 0.983 | D | 0.557 | neutral | N | 0.502877418 | None | None | N |
I/N | 0.436 | ambiguous | 0.507 | ambiguous | -0.432 | Destabilizing | 0.994 | D | 0.735 | prob.delet. | N | 0.474825051 | None | None | N |
I/P | 0.9273 | likely_pathogenic | 0.9427 | pathogenic | -0.532 | Destabilizing | 0.996 | D | 0.74 | deleterious | None | None | None | None | N |
I/Q | 0.5046 | ambiguous | 0.5793 | pathogenic | -0.633 | Destabilizing | 0.996 | D | 0.721 | prob.delet. | None | None | None | None | N |
I/R | 0.3979 | ambiguous | 0.4618 | ambiguous | 0.047 | Stabilizing | 0.987 | D | 0.735 | prob.delet. | None | None | None | None | N |
I/S | 0.4123 | ambiguous | 0.4893 | ambiguous | -0.922 | Destabilizing | 0.983 | D | 0.675 | neutral | N | 0.466028397 | None | None | N |
I/T | 0.2323 | likely_benign | 0.2906 | benign | -0.874 | Destabilizing | 0.892 | D | 0.625 | neutral | N | 0.411676624 | None | None | N |
I/V | 0.0956 | likely_benign | 0.1127 | benign | -0.532 | Destabilizing | 0.011 | N | 0.184 | neutral | N | 0.422645766 | None | None | N |
I/W | 0.7839 | likely_pathogenic | 0.8033 | pathogenic | -0.687 | Destabilizing | 0.999 | D | 0.694 | prob.neutral | None | None | None | None | N |
I/Y | 0.5945 | likely_pathogenic | 0.6412 | pathogenic | -0.457 | Destabilizing | 0.987 | D | 0.689 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.