Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22852 | 68779;68780;68781 | chr2:178577872;178577871;178577870 | chr2:179442599;179442598;179442597 |
N2AB | 21211 | 63856;63857;63858 | chr2:178577872;178577871;178577870 | chr2:179442599;179442598;179442597 |
N2A | 20284 | 61075;61076;61077 | chr2:178577872;178577871;178577870 | chr2:179442599;179442598;179442597 |
N2B | 13787 | 41584;41585;41586 | chr2:178577872;178577871;178577870 | chr2:179442599;179442598;179442597 |
Novex-1 | 13912 | 41959;41960;41961 | chr2:178577872;178577871;178577870 | chr2:179442599;179442598;179442597 |
Novex-2 | 13979 | 42160;42161;42162 | chr2:178577872;178577871;178577870 | chr2:179442599;179442598;179442597 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/K | rs780727295 | 0.604 | 0.124 | N | 0.586 | 0.105 | 0.0954503805726 | gnomAD-2.1.1 | 1.74E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.30229E-04 | None | 0 | None | 0 | 0 | 0 |
N/K | rs780727295 | 0.604 | 0.124 | N | 0.586 | 0.105 | 0.0954503805726 | gnomAD-4.0.0 | 3.3017E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.60538E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.1942 | likely_benign | 0.176 | benign | -0.557 | Destabilizing | 0.157 | N | 0.569 | neutral | None | None | None | None | N |
N/C | 0.2511 | likely_benign | 0.2296 | benign | 0.208 | Stabilizing | 0.909 | D | 0.663 | neutral | None | None | None | None | N |
N/D | 0.1304 | likely_benign | 0.1172 | benign | 0.009 | Stabilizing | 0.001 | N | 0.227 | neutral | N | 0.393016292 | None | None | N |
N/E | 0.4246 | ambiguous | 0.3791 | ambiguous | 0.016 | Stabilizing | 0.157 | N | 0.591 | neutral | None | None | None | None | N |
N/F | 0.5302 | ambiguous | 0.4999 | ambiguous | -0.688 | Destabilizing | 0.726 | D | 0.665 | neutral | None | None | None | None | N |
N/G | 0.2203 | likely_benign | 0.2083 | benign | -0.796 | Destabilizing | 0.072 | N | 0.617 | neutral | None | None | None | None | N |
N/H | 0.1137 | likely_benign | 0.1084 | benign | -0.725 | Destabilizing | 0.667 | D | 0.574 | neutral | D | 0.524735557 | None | None | N |
N/I | 0.3071 | likely_benign | 0.2489 | benign | None | Stabilizing | 0.497 | N | 0.654 | neutral | N | 0.486563958 | None | None | N |
N/K | 0.4578 | ambiguous | 0.42 | ambiguous | -0.033 | Destabilizing | 0.124 | N | 0.586 | neutral | N | 0.480675349 | None | None | N |
N/L | 0.2561 | likely_benign | 0.2352 | benign | None | Stabilizing | 0.567 | D | 0.569 | neutral | None | None | None | None | N |
N/M | 0.315 | likely_benign | 0.2895 | benign | 0.385 | Stabilizing | 0.968 | D | 0.628 | neutral | None | None | None | None | N |
N/P | 0.9276 | likely_pathogenic | 0.9121 | pathogenic | -0.157 | Destabilizing | 0.567 | D | 0.621 | neutral | None | None | None | None | N |
N/Q | 0.3417 | ambiguous | 0.3217 | benign | -0.579 | Destabilizing | 0.567 | D | 0.558 | neutral | None | None | None | None | N |
N/R | 0.424 | ambiguous | 0.4189 | ambiguous | -0.003 | Destabilizing | 0.567 | D | 0.553 | neutral | None | None | None | None | N |
N/S | 0.057 | likely_benign | 0.0542 | benign | -0.423 | Destabilizing | 0.001 | N | 0.11 | neutral | N | 0.458009133 | None | None | N |
N/T | 0.104 | likely_benign | 0.0969 | benign | -0.248 | Destabilizing | 0.124 | N | 0.574 | neutral | N | 0.492892498 | None | None | N |
N/V | 0.293 | likely_benign | 0.2442 | benign | -0.157 | Destabilizing | 0.567 | D | 0.637 | neutral | None | None | None | None | N |
N/W | 0.7533 | likely_pathogenic | 0.7376 | pathogenic | -0.551 | Destabilizing | 0.968 | D | 0.723 | prob.delet. | None | None | None | None | N |
N/Y | 0.2013 | likely_benign | 0.1818 | benign | -0.328 | Destabilizing | 0.667 | D | 0.639 | neutral | N | 0.47192867 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.