Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22954 | 69085;69086;69087 | chr2:178577475;178577474;178577473 | chr2:179442202;179442201;179442200 |
N2AB | 21313 | 64162;64163;64164 | chr2:178577475;178577474;178577473 | chr2:179442202;179442201;179442200 |
N2A | 20386 | 61381;61382;61383 | chr2:178577475;178577474;178577473 | chr2:179442202;179442201;179442200 |
N2B | 13889 | 41890;41891;41892 | chr2:178577475;178577474;178577473 | chr2:179442202;179442201;179442200 |
Novex-1 | 14014 | 42265;42266;42267 | chr2:178577475;178577474;178577473 | chr2:179442202;179442201;179442200 |
Novex-2 | 14081 | 42466;42467;42468 | chr2:178577475;178577474;178577473 | chr2:179442202;179442201;179442200 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/N | None | None | 0.967 | N | 0.651 | 0.339 | 0.326074293725 | gnomAD-4.0.0 | 6.92941E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.09099E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1382 | likely_benign | 0.1268 | benign | 0.085 | Stabilizing | 0.892 | D | 0.602 | neutral | N | 0.515663075 | None | None | N |
D/C | 0.5994 | likely_pathogenic | 0.5543 | ambiguous | 0.008 | Stabilizing | 0.999 | D | 0.727 | prob.delet. | None | None | None | None | N |
D/E | 0.1033 | likely_benign | 0.1013 | benign | -0.356 | Destabilizing | 0.011 | N | 0.229 | neutral | N | 0.417152306 | None | None | N |
D/F | 0.5945 | likely_pathogenic | 0.5363 | ambiguous | -0.102 | Destabilizing | 0.999 | D | 0.725 | prob.delet. | None | None | None | None | N |
D/G | 0.1221 | likely_benign | 0.109 | benign | 0.004 | Stabilizing | 0.892 | D | 0.653 | neutral | N | 0.520474249 | None | None | N |
D/H | 0.2699 | likely_benign | 0.2254 | benign | 0.436 | Stabilizing | 0.995 | D | 0.705 | prob.neutral | N | 0.481400369 | None | None | N |
D/I | 0.3738 | ambiguous | 0.3158 | benign | 0.223 | Stabilizing | 0.987 | D | 0.753 | deleterious | None | None | None | None | N |
D/K | 0.277 | likely_benign | 0.2346 | benign | 0.52 | Stabilizing | 0.845 | D | 0.654 | neutral | None | None | None | None | N |
D/L | 0.3795 | ambiguous | 0.3431 | ambiguous | 0.223 | Stabilizing | 0.975 | D | 0.745 | deleterious | None | None | None | None | N |
D/M | 0.5537 | ambiguous | 0.4862 | ambiguous | 0.102 | Stabilizing | 0.999 | D | 0.718 | prob.delet. | None | None | None | None | N |
D/N | 0.0938 | likely_benign | 0.0852 | benign | 0.357 | Stabilizing | 0.967 | D | 0.651 | neutral | N | 0.482166577 | None | None | N |
D/P | 0.5491 | ambiguous | 0.5202 | ambiguous | 0.195 | Stabilizing | 0.987 | D | 0.732 | prob.delet. | None | None | None | None | N |
D/Q | 0.2602 | likely_benign | 0.2312 | benign | 0.338 | Stabilizing | 0.95 | D | 0.681 | prob.neutral | None | None | None | None | N |
D/R | 0.3626 | ambiguous | 0.3063 | benign | 0.634 | Stabilizing | 0.975 | D | 0.717 | prob.delet. | None | None | None | None | N |
D/S | 0.1148 | likely_benign | 0.1031 | benign | 0.274 | Stabilizing | 0.916 | D | 0.634 | neutral | None | None | None | None | N |
D/T | 0.1906 | likely_benign | 0.1709 | benign | 0.343 | Stabilizing | 0.975 | D | 0.681 | prob.neutral | None | None | None | None | N |
D/V | 0.2091 | likely_benign | 0.183 | benign | 0.195 | Stabilizing | 0.983 | D | 0.746 | deleterious | N | 0.485755235 | None | None | N |
D/W | 0.8386 | likely_pathogenic | 0.8141 | pathogenic | -0.105 | Destabilizing | 0.999 | D | 0.733 | prob.delet. | None | None | None | None | N |
D/Y | 0.2245 | likely_benign | 0.1964 | benign | 0.112 | Stabilizing | 0.999 | D | 0.726 | prob.delet. | N | 0.493263653 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.