Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22959 | 69100;69101;69102 | chr2:178577460;178577459;178577458 | chr2:179442187;179442186;179442185 |
N2AB | 21318 | 64177;64178;64179 | chr2:178577460;178577459;178577458 | chr2:179442187;179442186;179442185 |
N2A | 20391 | 61396;61397;61398 | chr2:178577460;178577459;178577458 | chr2:179442187;179442186;179442185 |
N2B | 13894 | 41905;41906;41907 | chr2:178577460;178577459;178577458 | chr2:179442187;179442186;179442185 |
Novex-1 | 14019 | 42280;42281;42282 | chr2:178577460;178577459;178577458 | chr2:179442187;179442186;179442185 |
Novex-2 | 14086 | 42481;42482;42483 | chr2:178577460;178577459;178577458 | chr2:179442187;179442186;179442185 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/T | None | None | 0.997 | N | 0.596 | 0.437 | 0.477298106951 | gnomAD-4.0.0 | 1.62294E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.0722E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.7355 | likely_pathogenic | 0.5482 | ambiguous | -0.068 | Destabilizing | 0.985 | D | 0.626 | neutral | None | None | None | None | I |
K/C | 0.7767 | likely_pathogenic | 0.7251 | pathogenic | -0.349 | Destabilizing | 1.0 | D | 0.695 | prob.neutral | None | None | None | None | I |
K/D | 0.9355 | likely_pathogenic | 0.8579 | pathogenic | 0.12 | Stabilizing | 0.998 | D | 0.626 | neutral | None | None | None | None | I |
K/E | 0.5467 | ambiguous | 0.378 | ambiguous | 0.153 | Stabilizing | 0.98 | D | 0.631 | neutral | D | 0.525824141 | None | None | I |
K/F | 0.885 | likely_pathogenic | 0.8173 | pathogenic | -0.157 | Destabilizing | 0.996 | D | 0.666 | neutral | None | None | None | None | I |
K/G | 0.8119 | likely_pathogenic | 0.7024 | pathogenic | -0.301 | Destabilizing | 0.993 | D | 0.588 | neutral | None | None | None | None | I |
K/H | 0.3652 | ambiguous | 0.2868 | benign | -0.496 | Destabilizing | 1.0 | D | 0.614 | neutral | None | None | None | None | I |
K/I | 0.7158 | likely_pathogenic | 0.5454 | ambiguous | 0.474 | Stabilizing | 0.989 | D | 0.674 | neutral | N | 0.490531856 | None | None | I |
K/L | 0.5652 | likely_pathogenic | 0.4354 | ambiguous | 0.474 | Stabilizing | 0.971 | D | 0.623 | neutral | None | None | None | None | I |
K/M | 0.413 | ambiguous | 0.3137 | benign | 0.147 | Stabilizing | 0.931 | D | 0.551 | neutral | None | None | None | None | I |
K/N | 0.8007 | likely_pathogenic | 0.6698 | pathogenic | 0.023 | Stabilizing | 0.997 | D | 0.607 | neutral | N | 0.519340885 | None | None | I |
K/P | 0.8312 | likely_pathogenic | 0.7055 | pathogenic | 0.322 | Stabilizing | 0.999 | D | 0.637 | neutral | None | None | None | None | I |
K/Q | 0.2394 | likely_benign | 0.1686 | benign | -0.089 | Destabilizing | 0.994 | D | 0.628 | neutral | N | 0.482325422 | None | None | I |
K/R | 0.0751 | likely_benign | 0.0728 | benign | -0.129 | Destabilizing | 0.135 | N | 0.288 | neutral | N | 0.478686342 | None | None | I |
K/S | 0.815 | likely_pathogenic | 0.6628 | pathogenic | -0.487 | Destabilizing | 0.993 | D | 0.619 | neutral | None | None | None | None | I |
K/T | 0.5401 | ambiguous | 0.3306 | benign | -0.291 | Destabilizing | 0.997 | D | 0.596 | neutral | N | 0.521322398 | None | None | I |
K/V | 0.6667 | likely_pathogenic | 0.4874 | ambiguous | 0.322 | Stabilizing | 0.971 | D | 0.589 | neutral | None | None | None | None | I |
K/W | 0.8452 | likely_pathogenic | 0.7761 | pathogenic | -0.164 | Destabilizing | 1.0 | D | 0.705 | prob.neutral | None | None | None | None | I |
K/Y | 0.7776 | likely_pathogenic | 0.6978 | pathogenic | 0.176 | Stabilizing | 0.999 | D | 0.659 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.