Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 22984 | 69175;69176;69177 | chr2:178577385;178577384;178577383 | chr2:179442112;179442111;179442110 |
N2AB | 21343 | 64252;64253;64254 | chr2:178577385;178577384;178577383 | chr2:179442112;179442111;179442110 |
N2A | 20416 | 61471;61472;61473 | chr2:178577385;178577384;178577383 | chr2:179442112;179442111;179442110 |
N2B | 13919 | 41980;41981;41982 | chr2:178577385;178577384;178577383 | chr2:179442112;179442111;179442110 |
Novex-1 | 14044 | 42355;42356;42357 | chr2:178577385;178577384;178577383 | chr2:179442112;179442111;179442110 |
Novex-2 | 14111 | 42556;42557;42558 | chr2:178577385;178577384;178577383 | chr2:179442112;179442111;179442110 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | None | None | 0.505 | N | 0.422 | 0.145 | 0.107399877778 | gnomAD-4.0.0 | 2.05334E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.52564E-05 | None | 0 | 0 | 0 | 2.3197E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.3379 | likely_benign | 0.3264 | benign | -0.77 | Destabilizing | 0.991 | D | 0.463 | neutral | None | None | None | None | N |
A/D | 0.1275 | likely_benign | 0.1054 | benign | -0.338 | Destabilizing | 0.004 | N | 0.361 | neutral | None | None | None | None | N |
A/E | 0.1681 | likely_benign | 0.1459 | benign | -0.494 | Destabilizing | 0.007 | N | 0.284 | neutral | N | 0.413089628 | None | None | N |
A/F | 0.2412 | likely_benign | 0.2077 | benign | -0.826 | Destabilizing | 0.967 | D | 0.629 | neutral | None | None | None | None | N |
A/G | 0.0711 | likely_benign | 0.0688 | benign | -0.163 | Destabilizing | 0.001 | N | 0.153 | neutral | N | 0.391231489 | None | None | N |
A/H | 0.3641 | ambiguous | 0.3127 | benign | -0.195 | Destabilizing | 0.973 | D | 0.627 | neutral | None | None | None | None | N |
A/I | 0.2669 | likely_benign | 0.2289 | benign | -0.303 | Destabilizing | 0.906 | D | 0.523 | neutral | None | None | None | None | N |
A/K | 0.3665 | ambiguous | 0.3072 | benign | -0.441 | Destabilizing | 0.404 | N | 0.483 | neutral | None | None | None | None | N |
A/L | 0.1471 | likely_benign | 0.1361 | benign | -0.303 | Destabilizing | 0.826 | D | 0.479 | neutral | None | None | None | None | N |
A/M | 0.1839 | likely_benign | 0.159 | benign | -0.415 | Destabilizing | 0.991 | D | 0.55 | neutral | None | None | None | None | N |
A/N | 0.1191 | likely_benign | 0.1085 | benign | -0.152 | Destabilizing | 0.704 | D | 0.566 | neutral | None | None | None | None | N |
A/P | 0.4664 | ambiguous | 0.3724 | ambiguous | -0.222 | Destabilizing | 0.879 | D | 0.519 | neutral | N | 0.47025242 | None | None | N |
A/Q | 0.2479 | likely_benign | 0.2228 | benign | -0.421 | Destabilizing | 0.704 | D | 0.515 | neutral | None | None | None | None | N |
A/R | 0.3507 | ambiguous | 0.3019 | benign | -0.023 | Destabilizing | 0.826 | D | 0.516 | neutral | None | None | None | None | N |
A/S | 0.0755 | likely_benign | 0.0743 | benign | -0.35 | Destabilizing | 0.338 | N | 0.467 | neutral | N | 0.47025242 | None | None | N |
A/T | 0.0963 | likely_benign | 0.0889 | benign | -0.428 | Destabilizing | 0.505 | D | 0.422 | neutral | N | 0.485491231 | None | None | N |
A/V | 0.1393 | likely_benign | 0.1255 | benign | -0.222 | Destabilizing | 0.505 | D | 0.426 | neutral | N | 0.478930618 | None | None | N |
A/W | 0.6093 | likely_pathogenic | 0.5535 | ambiguous | -0.942 | Destabilizing | 0.991 | D | 0.7 | prob.neutral | None | None | None | None | N |
A/Y | 0.3016 | likely_benign | 0.2611 | benign | -0.6 | Destabilizing | 0.967 | D | 0.632 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.