Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23019 | 69280;69281;69282 | chr2:178577280;178577279;178577278 | chr2:179442007;179442006;179442005 |
N2AB | 21378 | 64357;64358;64359 | chr2:178577280;178577279;178577278 | chr2:179442007;179442006;179442005 |
N2A | 20451 | 61576;61577;61578 | chr2:178577280;178577279;178577278 | chr2:179442007;179442006;179442005 |
N2B | 13954 | 42085;42086;42087 | chr2:178577280;178577279;178577278 | chr2:179442007;179442006;179442005 |
Novex-1 | 14079 | 42460;42461;42462 | chr2:178577280;178577279;178577278 | chr2:179442007;179442006;179442005 |
Novex-2 | 14146 | 42661;42662;42663 | chr2:178577280;178577279;178577278 | chr2:179442007;179442006;179442005 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 0.125 | N | 0.448 | 0.146 | 0.339555952218 | gnomAD-4.0.0 | 3.1848E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.71971E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1061 | likely_benign | 0.0997 | benign | -1.242 | Destabilizing | 0.656 | D | 0.581 | neutral | N | 0.473332751 | None | None | N |
T/C | 0.3653 | ambiguous | 0.3404 | ambiguous | -0.927 | Destabilizing | 0.998 | D | 0.688 | prob.neutral | None | None | None | None | N |
T/D | 0.483 | ambiguous | 0.4642 | ambiguous | -1.787 | Destabilizing | 0.956 | D | 0.675 | neutral | None | None | None | None | N |
T/E | 0.3148 | likely_benign | 0.2973 | benign | -1.546 | Destabilizing | 0.754 | D | 0.637 | neutral | None | None | None | None | N |
T/F | 0.2807 | likely_benign | 0.2555 | benign | -0.932 | Destabilizing | 0.978 | D | 0.738 | prob.delet. | None | None | None | None | N |
T/G | 0.3642 | ambiguous | 0.3353 | benign | -1.669 | Destabilizing | 0.956 | D | 0.675 | neutral | None | None | None | None | N |
T/H | 0.2958 | likely_benign | 0.2794 | benign | -1.753 | Destabilizing | 0.994 | D | 0.727 | prob.delet. | None | None | None | None | N |
T/I | 0.1448 | likely_benign | 0.1238 | benign | -0.103 | Destabilizing | 0.125 | N | 0.448 | neutral | N | 0.455873606 | None | None | N |
T/K | 0.2697 | likely_benign | 0.2447 | benign | -0.343 | Destabilizing | 0.915 | D | 0.651 | neutral | None | None | None | None | N |
T/L | 0.1173 | likely_benign | 0.1144 | benign | -0.103 | Destabilizing | 0.754 | D | 0.625 | neutral | None | None | None | None | N |
T/M | 0.0909 | likely_benign | 0.0865 | benign | -0.221 | Destabilizing | 0.978 | D | 0.708 | prob.delet. | None | None | None | None | N |
T/N | 0.1743 | likely_benign | 0.1643 | benign | -1.207 | Destabilizing | 0.942 | D | 0.581 | neutral | N | 0.4827405 | None | None | N |
T/P | 0.8313 | likely_pathogenic | 0.8503 | pathogenic | -0.453 | Destabilizing | 0.97 | D | 0.71 | prob.delet. | N | 0.51245455 | None | None | N |
T/Q | 0.2397 | likely_benign | 0.2309 | benign | -0.903 | Destabilizing | 0.16 | N | 0.495 | neutral | None | None | None | None | N |
T/R | 0.2145 | likely_benign | 0.1984 | benign | -0.684 | Destabilizing | 0.915 | D | 0.696 | prob.neutral | None | None | None | None | N |
T/S | 0.1235 | likely_benign | 0.1205 | benign | -1.407 | Destabilizing | 0.822 | D | 0.568 | neutral | N | 0.494729577 | None | None | N |
T/V | 0.1207 | likely_benign | 0.1095 | benign | -0.453 | Destabilizing | 0.754 | D | 0.581 | neutral | None | None | None | None | N |
T/W | 0.6597 | likely_pathogenic | 0.6495 | pathogenic | -1.139 | Destabilizing | 0.998 | D | 0.724 | prob.delet. | None | None | None | None | N |
T/Y | 0.3321 | likely_benign | 0.3179 | benign | -0.718 | Destabilizing | 0.993 | D | 0.749 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.