Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2302 | 7129;7130;7131 | chr2:178774360;178774359;178774358 | chr2:179639087;179639086;179639085 |
N2AB | 2302 | 7129;7130;7131 | chr2:178774360;178774359;178774358 | chr2:179639087;179639086;179639085 |
N2A | 2302 | 7129;7130;7131 | chr2:178774360;178774359;178774358 | chr2:179639087;179639086;179639085 |
N2B | 2256 | 6991;6992;6993 | chr2:178774360;178774359;178774358 | chr2:179639087;179639086;179639085 |
Novex-1 | 2256 | 6991;6992;6993 | chr2:178774360;178774359;178774358 | chr2:179639087;179639086;179639085 |
Novex-2 | 2256 | 6991;6992;6993 | chr2:178774360;178774359;178774358 | chr2:179639087;179639086;179639085 |
Novex-3 | 2302 | 7129;7130;7131 | chr2:178774360;178774359;178774358 | chr2:179639087;179639086;179639085 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/I | None | None | 0.295 | D | 0.505 | 0.163 | 0.461845970543 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.1831 | likely_benign | 0.1724 | benign | -0.767 | Destabilizing | 0.007 | N | 0.312 | neutral | None | None | None | None | N |
N/C | 0.198 | likely_benign | 0.1854 | benign | 0.235 | Stabilizing | 0.864 | D | 0.447 | neutral | None | None | None | None | N |
N/D | 0.0879 | likely_benign | 0.0849 | benign | -0.273 | Destabilizing | None | N | 0.095 | neutral | N | 0.441182261 | None | None | N |
N/E | 0.2332 | likely_benign | 0.2223 | benign | -0.226 | Destabilizing | None | N | 0.087 | neutral | None | None | None | None | N |
N/F | 0.5511 | ambiguous | 0.5347 | ambiguous | -0.684 | Destabilizing | 0.628 | D | 0.481 | neutral | None | None | None | None | N |
N/G | 0.111 | likely_benign | 0.1083 | benign | -1.061 | Destabilizing | None | N | 0.085 | neutral | None | None | None | None | N |
N/H | 0.0915 | likely_benign | 0.0878 | benign | -0.993 | Destabilizing | 0.295 | N | 0.314 | neutral | D | 0.614165922 | None | None | N |
N/I | 0.4105 | ambiguous | 0.3793 | ambiguous | -0.036 | Destabilizing | 0.295 | N | 0.505 | neutral | D | 0.615427103 | None | None | N |
N/K | 0.1259 | likely_benign | 0.1214 | benign | -0.345 | Destabilizing | None | N | 0.08 | neutral | N | 0.506045531 | None | None | N |
N/L | 0.2675 | likely_benign | 0.2533 | benign | -0.036 | Destabilizing | 0.072 | N | 0.477 | neutral | None | None | None | None | N |
N/M | 0.3624 | ambiguous | 0.3484 | ambiguous | 0.415 | Stabilizing | 0.628 | D | 0.446 | neutral | None | None | None | None | N |
N/P | 0.874 | likely_pathogenic | 0.8619 | pathogenic | -0.251 | Destabilizing | 0.136 | N | 0.481 | neutral | None | None | None | None | N |
N/Q | 0.1711 | likely_benign | 0.1628 | benign | -0.723 | Destabilizing | 0.038 | N | 0.219 | neutral | None | None | None | None | N |
N/R | 0.1534 | likely_benign | 0.1487 | benign | -0.392 | Destabilizing | 0.038 | N | 0.205 | neutral | None | None | None | None | N |
N/S | 0.0804 | likely_benign | 0.0762 | benign | -0.674 | Destabilizing | 0.005 | N | 0.169 | neutral | D | 0.610895074 | None | None | N |
N/T | 0.2099 | likely_benign | 0.1922 | benign | -0.455 | Destabilizing | 0.024 | N | 0.193 | neutral | D | 0.614165922 | None | None | N |
N/V | 0.3659 | ambiguous | 0.3382 | benign | -0.251 | Destabilizing | 0.072 | N | 0.515 | neutral | None | None | None | None | N |
N/W | 0.6679 | likely_pathogenic | 0.6594 | pathogenic | -0.542 | Destabilizing | 0.864 | D | 0.449 | neutral | None | None | None | None | N |
N/Y | 0.194 | likely_benign | 0.1859 | benign | -0.358 | Destabilizing | 0.295 | N | 0.461 | neutral | D | 0.615427103 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.