Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23021 | 69286;69287;69288 | chr2:178577274;178577273;178577272 | chr2:179442001;179442000;179441999 |
N2AB | 21380 | 64363;64364;64365 | chr2:178577274;178577273;178577272 | chr2:179442001;179442000;179441999 |
N2A | 20453 | 61582;61583;61584 | chr2:178577274;178577273;178577272 | chr2:179442001;179442000;179441999 |
N2B | 13956 | 42091;42092;42093 | chr2:178577274;178577273;178577272 | chr2:179442001;179442000;179441999 |
Novex-1 | 14081 | 42466;42467;42468 | chr2:178577274;178577273;178577272 | chr2:179442001;179442000;179441999 |
Novex-2 | 14148 | 42667;42668;42669 | chr2:178577274;178577273;178577272 | chr2:179442001;179442000;179441999 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs1559469943 | None | 0.989 | N | 0.849 | 0.384 | 0.524894780827 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 0 |
T/I | rs1559469943 | None | 0.989 | N | 0.849 | 0.384 | 0.524894780827 | gnomAD-4.0.0 | 6.8443E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99633E-07 | 0 | 0 |
T/P | None | None | 0.989 | D | 0.849 | 0.662 | 0.589546583947 | gnomAD-4.0.0 | 1.59245E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85994E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1073 | likely_benign | 0.1023 | benign | -0.933 | Destabilizing | 0.726 | D | 0.595 | neutral | N | 0.494126254 | None | None | N |
T/C | 0.4155 | ambiguous | 0.3882 | ambiguous | -0.835 | Destabilizing | 0.999 | D | 0.836 | deleterious | None | None | None | None | N |
T/D | 0.7002 | likely_pathogenic | 0.6717 | pathogenic | -0.917 | Destabilizing | 0.983 | D | 0.777 | deleterious | None | None | None | None | N |
T/E | 0.3868 | ambiguous | 0.3584 | ambiguous | -0.916 | Destabilizing | 0.983 | D | 0.766 | deleterious | None | None | None | None | N |
T/F | 0.3206 | likely_benign | 0.2782 | benign | -1.306 | Destabilizing | 0.992 | D | 0.88 | deleterious | None | None | None | None | N |
T/G | 0.4216 | ambiguous | 0.413 | ambiguous | -1.134 | Destabilizing | 0.895 | D | 0.719 | prob.delet. | None | None | None | None | N |
T/H | 0.3166 | likely_benign | 0.2778 | benign | -1.519 | Destabilizing | 0.998 | D | 0.87 | deleterious | None | None | None | None | N |
T/I | 0.1783 | likely_benign | 0.1637 | benign | -0.486 | Destabilizing | 0.989 | D | 0.849 | deleterious | N | 0.517532731 | None | None | N |
T/K | 0.247 | likely_benign | 0.229 | benign | -0.619 | Destabilizing | 0.968 | D | 0.771 | deleterious | None | None | None | None | N |
T/L | 0.1231 | likely_benign | 0.1196 | benign | -0.486 | Destabilizing | 0.944 | D | 0.689 | prob.neutral | None | None | None | None | N |
T/M | 0.0952 | likely_benign | 0.0924 | benign | -0.114 | Destabilizing | 0.999 | D | 0.84 | deleterious | None | None | None | None | N |
T/N | 0.228 | likely_benign | 0.2233 | benign | -0.697 | Destabilizing | 0.957 | D | 0.731 | prob.delet. | N | 0.495696417 | None | None | N |
T/P | 0.8641 | likely_pathogenic | 0.8825 | pathogenic | -0.607 | Destabilizing | 0.989 | D | 0.849 | deleterious | D | 0.541401581 | None | None | N |
T/Q | 0.266 | likely_benign | 0.249 | benign | -1.015 | Destabilizing | 0.983 | D | 0.848 | deleterious | None | None | None | None | N |
T/R | 0.2153 | likely_benign | 0.1941 | benign | -0.358 | Destabilizing | 0.983 | D | 0.838 | deleterious | None | None | None | None | N |
T/S | 0.1483 | likely_benign | 0.1396 | benign | -0.912 | Destabilizing | 0.146 | N | 0.39 | neutral | N | 0.486884552 | None | None | N |
T/V | 0.1504 | likely_benign | 0.1381 | benign | -0.607 | Destabilizing | 0.944 | D | 0.613 | neutral | None | None | None | None | N |
T/W | 0.6914 | likely_pathogenic | 0.6585 | pathogenic | -1.229 | Destabilizing | 0.999 | D | 0.847 | deleterious | None | None | None | None | N |
T/Y | 0.3761 | ambiguous | 0.3408 | ambiguous | -0.924 | Destabilizing | 0.997 | D | 0.879 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.