Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23034 | 69325;69326;69327 | chr2:178577235;178577234;178577233 | chr2:179441962;179441961;179441960 |
N2AB | 21393 | 64402;64403;64404 | chr2:178577235;178577234;178577233 | chr2:179441962;179441961;179441960 |
N2A | 20466 | 61621;61622;61623 | chr2:178577235;178577234;178577233 | chr2:179441962;179441961;179441960 |
N2B | 13969 | 42130;42131;42132 | chr2:178577235;178577234;178577233 | chr2:179441962;179441961;179441960 |
Novex-1 | 14094 | 42505;42506;42507 | chr2:178577235;178577234;178577233 | chr2:179441962;179441961;179441960 |
Novex-2 | 14161 | 42706;42707;42708 | chr2:178577235;178577234;178577233 | chr2:179441962;179441961;179441960 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/Q | rs1347501041 | None | 0.782 | N | 0.666 | 0.184 | 0.190952846119 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
K/Q | rs1347501041 | None | 0.782 | N | 0.666 | 0.184 | 0.190952846119 | gnomAD-4.0.0 | 6.58337E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47158E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.2888 | likely_benign | 0.2406 | benign | -0.244 | Destabilizing | 0.575 | D | 0.671 | neutral | None | None | None | None | N |
K/C | 0.5886 | likely_pathogenic | 0.4894 | ambiguous | -0.385 | Destabilizing | 0.991 | D | 0.742 | deleterious | None | None | None | None | N |
K/D | 0.4923 | ambiguous | 0.4241 | ambiguous | 0.193 | Stabilizing | 0.826 | D | 0.675 | prob.neutral | None | None | None | None | N |
K/E | 0.1969 | likely_benign | 0.161 | benign | 0.218 | Stabilizing | 0.338 | N | 0.635 | neutral | N | 0.48666832 | None | None | N |
K/F | 0.6256 | likely_pathogenic | 0.544 | ambiguous | -0.386 | Destabilizing | 0.906 | D | 0.735 | prob.delet. | None | None | None | None | N |
K/G | 0.4515 | ambiguous | 0.4079 | ambiguous | -0.485 | Destabilizing | 0.575 | D | 0.681 | prob.neutral | None | None | None | None | N |
K/H | 0.1888 | likely_benign | 0.1675 | benign | -0.86 | Destabilizing | 0.004 | N | 0.354 | neutral | None | None | None | None | N |
K/I | 0.2656 | likely_benign | 0.2136 | benign | 0.322 | Stabilizing | 0.906 | D | 0.733 | prob.delet. | None | None | None | None | N |
K/L | 0.2765 | likely_benign | 0.2268 | benign | 0.322 | Stabilizing | 0.575 | D | 0.675 | neutral | None | None | None | None | N |
K/M | 0.1659 | likely_benign | 0.1399 | benign | 0.279 | Stabilizing | 0.988 | D | 0.686 | prob.neutral | D | 0.531424748 | None | None | N |
K/N | 0.2743 | likely_benign | 0.2311 | benign | 0.085 | Stabilizing | 0.505 | D | 0.639 | neutral | N | 0.465391757 | None | None | N |
K/P | 0.6233 | likely_pathogenic | 0.5505 | ambiguous | 0.163 | Stabilizing | 0.906 | D | 0.719 | prob.delet. | None | None | None | None | N |
K/Q | 0.1363 | likely_benign | 0.1162 | benign | -0.147 | Destabilizing | 0.782 | D | 0.666 | neutral | N | 0.491076849 | None | None | N |
K/R | 0.0875 | likely_benign | 0.0818 | benign | -0.151 | Destabilizing | 0.003 | N | 0.265 | neutral | N | 0.467450628 | None | None | N |
K/S | 0.3156 | likely_benign | 0.2741 | benign | -0.549 | Destabilizing | 0.575 | D | 0.622 | neutral | None | None | None | None | N |
K/T | 0.1234 | likely_benign | 0.1022 | benign | -0.357 | Destabilizing | 0.782 | D | 0.677 | prob.neutral | N | 0.47781955 | None | None | N |
K/V | 0.2689 | likely_benign | 0.2118 | benign | 0.163 | Stabilizing | 0.826 | D | 0.694 | prob.neutral | None | None | None | None | N |
K/W | 0.6398 | likely_pathogenic | 0.561 | ambiguous | -0.28 | Destabilizing | 0.991 | D | 0.724 | prob.delet. | None | None | None | None | N |
K/Y | 0.5015 | ambiguous | 0.4379 | ambiguous | 0.065 | Stabilizing | 0.704 | D | 0.749 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.