Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23051 | 69376;69377;69378 | chr2:178577184;178577183;178577182 | chr2:179441911;179441910;179441909 |
N2AB | 21410 | 64453;64454;64455 | chr2:178577184;178577183;178577182 | chr2:179441911;179441910;179441909 |
N2A | 20483 | 61672;61673;61674 | chr2:178577184;178577183;178577182 | chr2:179441911;179441910;179441909 |
N2B | 13986 | 42181;42182;42183 | chr2:178577184;178577183;178577182 | chr2:179441911;179441910;179441909 |
Novex-1 | 14111 | 42556;42557;42558 | chr2:178577184;178577183;178577182 | chr2:179441911;179441910;179441909 |
Novex-2 | 14178 | 42757;42758;42759 | chr2:178577184;178577183;178577182 | chr2:179441911;179441910;179441909 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/H | None | None | 0.97 | N | 0.565 | 0.286 | 0.19670166235 | gnomAD-4.0.0 | 1.59281E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.78676E-05 | None | 0 | 0 | 0 | 0 | 0 |
N/T | None | None | 0.698 | N | 0.549 | 0.122 | 0.265010934533 | gnomAD-4.0.0 | 3.1856E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 2.41779E-04 | 2.86061E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.1681 | likely_benign | 0.169 | benign | -0.245 | Destabilizing | 0.754 | D | 0.555 | neutral | None | None | None | None | N |
N/C | 0.2622 | likely_benign | 0.2431 | benign | 0.349 | Stabilizing | 0.998 | D | 0.665 | neutral | None | None | None | None | N |
N/D | 0.1608 | likely_benign | 0.1665 | benign | 0.157 | Stabilizing | 0.698 | D | 0.601 | neutral | N | 0.430457172 | None | None | N |
N/E | 0.4338 | ambiguous | 0.453 | ambiguous | 0.101 | Stabilizing | 0.019 | N | 0.234 | neutral | None | None | None | None | N |
N/F | 0.5143 | ambiguous | 0.5042 | ambiguous | -0.758 | Destabilizing | 0.993 | D | 0.66 | neutral | None | None | None | None | N |
N/G | 0.1775 | likely_benign | 0.1829 | benign | -0.371 | Destabilizing | 0.559 | D | 0.572 | neutral | None | None | None | None | N |
N/H | 0.1018 | likely_benign | 0.0992 | benign | -0.446 | Destabilizing | 0.97 | D | 0.565 | neutral | N | 0.502109414 | None | None | N |
N/I | 0.3518 | ambiguous | 0.3517 | ambiguous | -0.01 | Destabilizing | 0.97 | D | 0.646 | neutral | N | 0.469473135 | None | None | N |
N/K | 0.4492 | ambiguous | 0.4497 | ambiguous | 0.227 | Stabilizing | 0.698 | D | 0.547 | neutral | N | 0.466129971 | None | None | N |
N/L | 0.2588 | likely_benign | 0.2648 | benign | -0.01 | Destabilizing | 0.956 | D | 0.534 | neutral | None | None | None | None | N |
N/M | 0.3401 | ambiguous | 0.3442 | ambiguous | 0.322 | Stabilizing | 0.998 | D | 0.619 | neutral | None | None | None | None | N |
N/P | 0.7738 | likely_pathogenic | 0.8054 | pathogenic | -0.064 | Destabilizing | 0.978 | D | 0.607 | neutral | None | None | None | None | N |
N/Q | 0.3364 | likely_benign | 0.342 | ambiguous | -0.243 | Destabilizing | 0.915 | D | 0.522 | neutral | None | None | None | None | N |
N/R | 0.4358 | ambiguous | 0.4268 | ambiguous | 0.279 | Stabilizing | 0.956 | D | 0.523 | neutral | None | None | None | None | N |
N/S | 0.0678 | likely_benign | 0.0673 | benign | 0.011 | Stabilizing | 0.058 | N | 0.109 | neutral | N | 0.433497478 | None | None | N |
N/T | 0.135 | likely_benign | 0.1407 | benign | 0.085 | Stabilizing | 0.698 | D | 0.549 | neutral | N | 0.49935711 | None | None | N |
N/V | 0.2771 | likely_benign | 0.2797 | benign | -0.064 | Destabilizing | 0.956 | D | 0.576 | neutral | None | None | None | None | N |
N/W | 0.7654 | likely_pathogenic | 0.7488 | pathogenic | -0.797 | Destabilizing | 0.998 | D | 0.72 | prob.delet. | None | None | None | None | N |
N/Y | 0.1906 | likely_benign | 0.1881 | benign | -0.499 | Destabilizing | 0.99 | D | 0.632 | neutral | D | 0.522850045 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.