Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC2307769454;69455;69456 chr2:178577106;178577105;178577104chr2:179441833;179441832;179441831
N2AB2143664531;64532;64533 chr2:178577106;178577105;178577104chr2:179441833;179441832;179441831
N2A2050961750;61751;61752 chr2:178577106;178577105;178577104chr2:179441833;179441832;179441831
N2B1401242259;42260;42261 chr2:178577106;178577105;178577104chr2:179441833;179441832;179441831
Novex-11413742634;42635;42636 chr2:178577106;178577105;178577104chr2:179441833;179441832;179441831
Novex-21420442835;42836;42837 chr2:178577106;178577105;178577104chr2:179441833;179441832;179441831
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: L
  • RefSeq wild type transcript codon: CTT
  • RefSeq wild type template codon: GAA
  • Domain: Fn3-55
  • Domain position: 38
  • Structural Position: 40
  • Q(SASA): 0.0795
  • Predicted PPI site: N

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
L/F rs529270980 -1.827 0.988 N 0.784 0.444 None gnomAD-2.1.1 1.07E-05 None None None None N None 1.24028E-04 0 None 0 0 None 0 None 0 0 0
L/F rs529270980 -1.827 0.988 N 0.784 0.444 None gnomAD-3.1.2 2.63E-05 None None None None N None 9.66E-05 0 0 0 0 None 0 0 0 0 0
L/F rs529270980 -1.827 0.988 N 0.784 0.444 None 1000 genomes 1.99681E-04 None None None None N None 8E-04 0 None None 0 0 None None None 0 None
L/F rs529270980 -1.827 0.988 N 0.784 0.444 None gnomAD-4.0.0 1.05378E-05 None None None None N None 1.46729E-04 0 None 0 0 None 0 0 5.08672E-06 0 0
L/I None None 0.067 N 0.368 0.114 0.283371740733 gnomAD-4.0.0 6.84378E-07 None None None None N None 0 0 None 0 0 None 0 0 8.9963E-07 0 0
L/P rs772742230 -2.22 0.998 N 0.893 0.633 0.86346069705 gnomAD-2.1.1 4.03E-06 None None None None N None 0 0 None 0 0 None 3.27E-05 None 0 0 0
L/P rs772742230 -2.22 0.998 N 0.893 0.633 0.86346069705 gnomAD-4.0.0 1.59217E-06 None None None None N None 0 0 None 0 0 None 0 0 0 1.43308E-05 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
L/A 0.8954 likely_pathogenic 0.8688 pathogenic -2.958 Highly Destabilizing 0.968 D 0.686 prob.neutral None None None None N
L/C 0.8953 likely_pathogenic 0.8736 pathogenic -2.149 Highly Destabilizing 1.0 D 0.822 deleterious None None None None N
L/D 0.9997 likely_pathogenic 0.9996 pathogenic -3.735 Highly Destabilizing 0.998 D 0.881 deleterious None None None None N
L/E 0.9974 likely_pathogenic 0.9966 pathogenic -3.407 Highly Destabilizing 0.998 D 0.883 deleterious None None None None N
L/F 0.7891 likely_pathogenic 0.7507 pathogenic -1.779 Destabilizing 0.988 D 0.784 deleterious N 0.506179078 None None N
L/G 0.9934 likely_pathogenic 0.992 pathogenic -3.579 Highly Destabilizing 0.995 D 0.869 deleterious None None None None N
L/H 0.9947 likely_pathogenic 0.9935 pathogenic -3.196 Highly Destabilizing 0.999 D 0.874 deleterious N 0.517788873 None None N
L/I 0.0975 likely_benign 0.0907 benign -1.083 Destabilizing 0.067 N 0.368 neutral N 0.386700821 None None N
L/K 0.9964 likely_pathogenic 0.9956 pathogenic -2.405 Highly Destabilizing 0.995 D 0.869 deleterious None None None None N
L/M 0.3432 ambiguous 0.3074 benign -1.18 Destabilizing 0.991 D 0.733 prob.delet. None None None None N
L/N 0.9984 likely_pathogenic 0.9979 pathogenic -3.133 Highly Destabilizing 0.998 D 0.897 deleterious None None None None N
L/P 0.9957 likely_pathogenic 0.9955 pathogenic -1.7 Destabilizing 0.998 D 0.893 deleterious N 0.506432568 None None N
L/Q 0.9908 likely_pathogenic 0.9882 pathogenic -2.792 Highly Destabilizing 1.0 D 0.905 deleterious None None None None N
L/R 0.9913 likely_pathogenic 0.9897 pathogenic -2.375 Highly Destabilizing 0.998 D 0.886 deleterious N 0.517788873 None None N
L/S 0.9919 likely_pathogenic 0.9886 pathogenic -3.708 Highly Destabilizing 0.995 D 0.875 deleterious None None None None N
L/T 0.9249 likely_pathogenic 0.9023 pathogenic -3.214 Highly Destabilizing 0.991 D 0.803 deleterious None None None None N
L/V 0.0953 likely_benign 0.0893 benign -1.7 Destabilizing 0.618 D 0.632 neutral N 0.36235695 None None N
L/W 0.9827 likely_pathogenic 0.9796 pathogenic -2.206 Highly Destabilizing 1.0 D 0.823 deleterious None None None None N
L/Y 0.9872 likely_pathogenic 0.983 pathogenic -1.994 Destabilizing 0.995 D 0.837 deleterious None None None None N

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.