Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23100 | 69523;69524;69525 | chr2:178577037;178577036;178577035 | chr2:179441764;179441763;179441762 |
N2AB | 21459 | 64600;64601;64602 | chr2:178577037;178577036;178577035 | chr2:179441764;179441763;179441762 |
N2A | 20532 | 61819;61820;61821 | chr2:178577037;178577036;178577035 | chr2:179441764;179441763;179441762 |
N2B | 14035 | 42328;42329;42330 | chr2:178577037;178577036;178577035 | chr2:179441764;179441763;179441762 |
Novex-1 | 14160 | 42703;42704;42705 | chr2:178577037;178577036;178577035 | chr2:179441764;179441763;179441762 |
Novex-2 | 14227 | 42904;42905;42906 | chr2:178577037;178577036;178577035 | chr2:179441764;179441763;179441762 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.014 | N | 0.231 | 0.142 | 0.434045841721 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.2406 | likely_benign | 0.2406 | benign | -1.081 | Destabilizing | 0.014 | N | 0.231 | neutral | N | 0.493103142 | None | None | N |
V/C | 0.7947 | likely_pathogenic | 0.7697 | pathogenic | -0.622 | Destabilizing | 0.994 | D | 0.677 | prob.neutral | None | None | None | None | N |
V/D | 0.5913 | likely_pathogenic | 0.6239 | pathogenic | -1.077 | Destabilizing | 0.978 | D | 0.753 | deleterious | None | None | None | None | N |
V/E | 0.4414 | ambiguous | 0.4862 | ambiguous | -1.157 | Destabilizing | 0.942 | D | 0.664 | neutral | N | 0.489004044 | None | None | N |
V/F | 0.2742 | likely_benign | 0.264 | benign | -1.064 | Destabilizing | 0.978 | D | 0.692 | prob.neutral | None | None | None | None | N |
V/G | 0.3756 | ambiguous | 0.3573 | ambiguous | -1.301 | Destabilizing | 0.698 | D | 0.668 | neutral | N | 0.477080004 | None | None | N |
V/H | 0.6598 | likely_pathogenic | 0.6525 | pathogenic | -0.888 | Destabilizing | 0.043 | N | 0.502 | neutral | None | None | None | None | N |
V/I | 0.0765 | likely_benign | 0.0723 | benign | -0.615 | Destabilizing | 0.86 | D | 0.501 | neutral | None | None | None | None | N |
V/K | 0.5037 | ambiguous | 0.533 | ambiguous | -0.998 | Destabilizing | 0.956 | D | 0.674 | neutral | None | None | None | None | N |
V/L | 0.2759 | likely_benign | 0.2466 | benign | -0.615 | Destabilizing | 0.489 | N | 0.512 | neutral | N | 0.466532616 | None | None | N |
V/M | 0.1558 | likely_benign | 0.1484 | benign | -0.384 | Destabilizing | 0.99 | D | 0.551 | neutral | N | 0.468330591 | None | None | N |
V/N | 0.3595 | ambiguous | 0.3203 | benign | -0.646 | Destabilizing | 0.956 | D | 0.764 | deleterious | None | None | None | None | N |
V/P | 0.7137 | likely_pathogenic | 0.689 | pathogenic | -0.736 | Destabilizing | 0.978 | D | 0.739 | prob.delet. | None | None | None | None | N |
V/Q | 0.4063 | ambiguous | 0.4077 | ambiguous | -0.915 | Destabilizing | 0.978 | D | 0.742 | deleterious | None | None | None | None | N |
V/R | 0.496 | ambiguous | 0.5169 | ambiguous | -0.374 | Destabilizing | 0.978 | D | 0.767 | deleterious | None | None | None | None | N |
V/S | 0.2844 | likely_benign | 0.2638 | benign | -1.011 | Destabilizing | 0.754 | D | 0.632 | neutral | None | None | None | None | N |
V/T | 0.152 | likely_benign | 0.1538 | benign | -0.998 | Destabilizing | 0.86 | D | 0.469 | neutral | None | None | None | None | N |
V/W | 0.8759 | likely_pathogenic | 0.8634 | pathogenic | -1.188 | Destabilizing | 0.998 | D | 0.757 | deleterious | None | None | None | None | N |
V/Y | 0.6728 | likely_pathogenic | 0.6662 | pathogenic | -0.923 | Destabilizing | 0.956 | D | 0.682 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.