Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23102 | 69529;69530;69531 | chr2:178577031;178577030;178577029 | chr2:179441758;179441757;179441756 |
N2AB | 21461 | 64606;64607;64608 | chr2:178577031;178577030;178577029 | chr2:179441758;179441757;179441756 |
N2A | 20534 | 61825;61826;61827 | chr2:178577031;178577030;178577029 | chr2:179441758;179441757;179441756 |
N2B | 14037 | 42334;42335;42336 | chr2:178577031;178577030;178577029 | chr2:179441758;179441757;179441756 |
Novex-1 | 14162 | 42709;42710;42711 | chr2:178577031;178577030;178577029 | chr2:179441758;179441757;179441756 |
Novex-2 | 14229 | 42910;42911;42912 | chr2:178577031;178577030;178577029 | chr2:179441758;179441757;179441756 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/S | rs1372466257 | -0.61 | None | N | 0.109 | 0.098 | 0.12205267543 | gnomAD-2.1.1 | 8.06E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.1147E-04 | None | 0 | None | 0 | 0 | 0 |
T/S | rs1372466257 | -0.61 | None | N | 0.109 | 0.098 | 0.12205267543 | gnomAD-4.0.0 | 1.59186E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77408E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0894 | likely_benign | 0.0798 | benign | -0.414 | Destabilizing | None | N | 0.107 | neutral | N | 0.477955831 | None | None | N |
T/C | 0.3912 | ambiguous | 0.3069 | benign | -0.334 | Destabilizing | 0.001 | N | 0.255 | neutral | None | None | None | None | N |
T/D | 0.4457 | ambiguous | 0.4319 | ambiguous | 0.145 | Stabilizing | 0.104 | N | 0.395 | neutral | None | None | None | None | N |
T/E | 0.3551 | ambiguous | 0.366 | ambiguous | 0.129 | Stabilizing | 0.055 | N | 0.377 | neutral | None | None | None | None | N |
T/F | 0.2954 | likely_benign | 0.2637 | benign | -0.568 | Destabilizing | 0.667 | D | 0.541 | neutral | None | None | None | None | N |
T/G | 0.1656 | likely_benign | 0.1351 | benign | -0.638 | Destabilizing | 0.055 | N | 0.329 | neutral | None | None | None | None | N |
T/H | 0.2787 | likely_benign | 0.2502 | benign | -0.823 | Destabilizing | 0.667 | D | 0.471 | neutral | None | None | None | None | N |
T/I | 0.24 | likely_benign | 0.2055 | benign | 0.075 | Stabilizing | 0.175 | N | 0.426 | neutral | N | 0.482514961 | None | None | N |
T/K | 0.2316 | likely_benign | 0.2606 | benign | -0.516 | Destabilizing | 0.055 | N | 0.373 | neutral | None | None | None | None | N |
T/L | 0.1077 | likely_benign | 0.0969 | benign | 0.075 | Stabilizing | 0.055 | N | 0.373 | neutral | None | None | None | None | N |
T/M | 0.1105 | likely_benign | 0.0999 | benign | 0.045 | Stabilizing | 0.667 | D | 0.453 | neutral | None | None | None | None | N |
T/N | 0.1286 | likely_benign | 0.1183 | benign | -0.395 | Destabilizing | 0.175 | N | 0.259 | neutral | N | 0.517828228 | None | None | N |
T/P | 0.1208 | likely_benign | 0.1128 | benign | -0.055 | Destabilizing | None | N | 0.192 | neutral | N | 0.480740535 | None | None | N |
T/Q | 0.2267 | likely_benign | 0.2199 | benign | -0.505 | Destabilizing | 0.011 | N | 0.246 | neutral | None | None | None | None | N |
T/R | 0.2196 | likely_benign | 0.2382 | benign | -0.287 | Destabilizing | 0.22 | N | 0.429 | neutral | None | None | None | None | N |
T/S | 0.0951 | likely_benign | 0.0848 | benign | -0.634 | Destabilizing | None | N | 0.109 | neutral | N | 0.472709227 | None | None | N |
T/V | 0.1455 | likely_benign | 0.1247 | benign | -0.055 | Destabilizing | 0.055 | N | 0.264 | neutral | None | None | None | None | N |
T/W | 0.5727 | likely_pathogenic | 0.531 | ambiguous | -0.591 | Destabilizing | 0.958 | D | 0.479 | neutral | None | None | None | None | N |
T/Y | 0.3072 | likely_benign | 0.2891 | benign | -0.323 | Destabilizing | 0.859 | D | 0.507 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.