Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23111 | 69556;69557;69558 | chr2:178577004;178577003;178577002 | chr2:179441731;179441730;179441729 |
N2AB | 21470 | 64633;64634;64635 | chr2:178577004;178577003;178577002 | chr2:179441731;179441730;179441729 |
N2A | 20543 | 61852;61853;61854 | chr2:178577004;178577003;178577002 | chr2:179441731;179441730;179441729 |
N2B | 14046 | 42361;42362;42363 | chr2:178577004;178577003;178577002 | chr2:179441731;179441730;179441729 |
Novex-1 | 14171 | 42736;42737;42738 | chr2:178577004;178577003;178577002 | chr2:179441731;179441730;179441729 |
Novex-2 | 14238 | 42937;42938;42939 | chr2:178577004;178577003;178577002 | chr2:179441731;179441730;179441729 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | rs1398776954 | -1.53 | None | N | 0.207 | 0.184 | 0.158396225186 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 6.48E-05 | 0 |
I/V | rs1398776954 | -1.53 | None | N | 0.207 | 0.184 | 0.158396225186 | gnomAD-4.0.0 | 5.47461E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 7.1969E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.4344 | ambiguous | 0.3581 | ambiguous | -2.718 | Highly Destabilizing | 0.072 | N | 0.698 | prob.neutral | None | None | None | None | N |
I/C | 0.5659 | likely_pathogenic | 0.5102 | ambiguous | -1.753 | Destabilizing | 0.909 | D | 0.729 | prob.delet. | None | None | None | None | N |
I/D | 0.8333 | likely_pathogenic | 0.7951 | pathogenic | -3.161 | Highly Destabilizing | 0.726 | D | 0.815 | deleterious | None | None | None | None | N |
I/E | 0.6237 | likely_pathogenic | 0.5753 | pathogenic | -2.907 | Highly Destabilizing | 0.726 | D | 0.797 | deleterious | None | None | None | None | N |
I/F | 0.2181 | likely_benign | 0.1937 | benign | -1.529 | Destabilizing | 0.331 | N | 0.721 | prob.delet. | N | 0.505146932 | None | None | N |
I/G | 0.7408 | likely_pathogenic | 0.6735 | pathogenic | -3.245 | Highly Destabilizing | 0.726 | D | 0.78 | deleterious | None | None | None | None | N |
I/H | 0.5727 | likely_pathogenic | 0.5234 | ambiguous | -2.746 | Highly Destabilizing | 0.968 | D | 0.809 | deleterious | None | None | None | None | N |
I/K | 0.5763 | likely_pathogenic | 0.5425 | ambiguous | -1.906 | Destabilizing | 0.726 | D | 0.787 | deleterious | None | None | None | None | N |
I/L | 0.0902 | likely_benign | 0.077 | benign | -1.16 | Destabilizing | None | N | 0.261 | neutral | N | 0.481096636 | None | None | N |
I/M | 0.1137 | likely_benign | 0.0967 | benign | -1.206 | Destabilizing | 0.331 | N | 0.724 | prob.delet. | D | 0.523906051 | None | None | N |
I/N | 0.4009 | ambiguous | 0.3594 | ambiguous | -2.342 | Highly Destabilizing | 0.859 | D | 0.819 | deleterious | N | 0.501623837 | None | None | N |
I/P | 0.9828 | likely_pathogenic | 0.9803 | pathogenic | -1.667 | Destabilizing | 0.726 | D | 0.813 | deleterious | None | None | None | None | N |
I/Q | 0.4598 | ambiguous | 0.4127 | ambiguous | -2.139 | Highly Destabilizing | 0.89 | D | 0.821 | deleterious | None | None | None | None | N |
I/R | 0.4734 | ambiguous | 0.4342 | ambiguous | -1.727 | Destabilizing | 0.726 | D | 0.819 | deleterious | None | None | None | None | N |
I/S | 0.3481 | ambiguous | 0.2985 | benign | -2.938 | Highly Destabilizing | 0.497 | N | 0.743 | deleterious | N | 0.507915091 | None | None | N |
I/T | 0.2504 | likely_benign | 0.2064 | benign | -2.554 | Highly Destabilizing | 0.124 | N | 0.747 | deleterious | N | 0.468625985 | None | None | N |
I/V | 0.069 | likely_benign | 0.0623 | benign | -1.667 | Destabilizing | None | N | 0.207 | neutral | N | 0.507088372 | None | None | N |
I/W | 0.8151 | likely_pathogenic | 0.7949 | pathogenic | -1.949 | Destabilizing | 0.968 | D | 0.798 | deleterious | None | None | None | None | N |
I/Y | 0.5334 | ambiguous | 0.5197 | ambiguous | -1.728 | Destabilizing | 0.726 | D | 0.761 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.