Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23119 | 69580;69581;69582 | chr2:178576980;178576979;178576978 | chr2:179441707;179441706;179441705 |
N2AB | 21478 | 64657;64658;64659 | chr2:178576980;178576979;178576978 | chr2:179441707;179441706;179441705 |
N2A | 20551 | 61876;61877;61878 | chr2:178576980;178576979;178576978 | chr2:179441707;179441706;179441705 |
N2B | 14054 | 42385;42386;42387 | chr2:178576980;178576979;178576978 | chr2:179441707;179441706;179441705 |
Novex-1 | 14179 | 42760;42761;42762 | chr2:178576980;178576979;178576978 | chr2:179441707;179441706;179441705 |
Novex-2 | 14246 | 42961;42962;42963 | chr2:178576980;178576979;178576978 | chr2:179441707;179441706;179441705 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/R | None | None | 0.012 | N | 0.244 | 0.251 | 0.171388866994 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.1107 | likely_benign | 0.0929 | benign | 0.288 | Stabilizing | 0.007 | N | 0.359 | neutral | None | None | None | None | I |
H/C | 0.1276 | likely_benign | 0.1175 | benign | 0.445 | Stabilizing | 0.864 | D | 0.356 | neutral | None | None | None | None | I |
H/D | 0.1144 | likely_benign | 0.1157 | benign | -0.235 | Destabilizing | 0.024 | N | 0.367 | neutral | N | 0.355978056 | None | None | I |
H/E | 0.1404 | likely_benign | 0.127 | benign | -0.214 | Destabilizing | 0.007 | N | 0.235 | neutral | None | None | None | None | I |
H/F | 0.2425 | likely_benign | 0.2133 | benign | 0.93 | Stabilizing | 0.072 | N | 0.385 | neutral | None | None | None | None | I |
H/G | 0.1822 | likely_benign | 0.166 | benign | 0.048 | Stabilizing | 0.031 | N | 0.385 | neutral | None | None | None | None | I |
H/I | 0.1297 | likely_benign | 0.1152 | benign | 0.893 | Stabilizing | 0.038 | N | 0.409 | neutral | None | None | None | None | I |
H/K | 0.1159 | likely_benign | 0.1221 | benign | 0.227 | Stabilizing | 0.016 | N | 0.332 | neutral | None | None | None | None | I |
H/L | 0.0681 | likely_benign | 0.0648 | benign | 0.893 | Stabilizing | None | N | 0.141 | neutral | N | 0.410697976 | None | None | I |
H/M | 0.2232 | likely_benign | 0.192 | benign | 0.531 | Stabilizing | 0.214 | N | 0.405 | neutral | None | None | None | None | I |
H/N | 0.0636 | likely_benign | 0.0608 | benign | 0.031 | Stabilizing | 0.024 | N | 0.229 | neutral | N | 0.399248831 | None | None | I |
H/P | 0.1158 | likely_benign | 0.1157 | benign | 0.714 | Stabilizing | 0.106 | N | 0.427 | neutral | N | 0.395883239 | None | None | I |
H/Q | 0.0837 | likely_benign | 0.0753 | benign | 0.13 | Stabilizing | None | N | 0.082 | neutral | N | 0.350321521 | None | None | I |
H/R | 0.0764 | likely_benign | 0.0776 | benign | -0.259 | Destabilizing | 0.012 | N | 0.244 | neutral | N | 0.371678228 | None | None | I |
H/S | 0.1073 | likely_benign | 0.0985 | benign | 0.139 | Stabilizing | 0.016 | N | 0.326 | neutral | None | None | None | None | I |
H/T | 0.1049 | likely_benign | 0.0962 | benign | 0.26 | Stabilizing | 0.031 | N | 0.355 | neutral | None | None | None | None | I |
H/V | 0.1111 | likely_benign | 0.0985 | benign | 0.714 | Stabilizing | 0.016 | N | 0.382 | neutral | None | None | None | None | I |
H/W | 0.3683 | ambiguous | 0.3655 | ambiguous | 0.876 | Stabilizing | 0.864 | D | 0.369 | neutral | None | None | None | None | I |
H/Y | 0.0888 | likely_benign | 0.0898 | benign | 1.101 | Stabilizing | 0.106 | N | 0.259 | neutral | N | 0.471477076 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.