Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2312 | 7159;7160;7161 | chr2:178774330;178774329;178774328 | chr2:179639057;179639056;179639055 |
N2AB | 2312 | 7159;7160;7161 | chr2:178774330;178774329;178774328 | chr2:179639057;179639056;179639055 |
N2A | 2312 | 7159;7160;7161 | chr2:178774330;178774329;178774328 | chr2:179639057;179639056;179639055 |
N2B | 2266 | 7021;7022;7023 | chr2:178774330;178774329;178774328 | chr2:179639057;179639056;179639055 |
Novex-1 | 2266 | 7021;7022;7023 | chr2:178774330;178774329;178774328 | chr2:179639057;179639056;179639055 |
Novex-2 | 2266 | 7021;7022;7023 | chr2:178774330;178774329;178774328 | chr2:179639057;179639056;179639055 |
Novex-3 | 2312 | 7159;7160;7161 | chr2:178774330;178774329;178774328 | chr2:179639057;179639056;179639055 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | None | None | 0.999 | N | 0.752 | 0.756 | 0.7168682315 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
Y/H | None | None | 0.046 | N | 0.351 | 0.428 | 0.335164054921 | gnomAD-4.0.0 | 6.00161E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 6.56251E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9307 | likely_pathogenic | 0.9409 | pathogenic | -2.961 | Highly Destabilizing | 0.953 | D | 0.626 | neutral | None | None | None | None | N |
Y/C | 0.4034 | ambiguous | 0.4272 | ambiguous | -2.284 | Highly Destabilizing | 0.999 | D | 0.752 | deleterious | N | 0.508651577 | None | None | N |
Y/D | 0.9297 | likely_pathogenic | 0.9412 | pathogenic | -3.008 | Highly Destabilizing | 0.982 | D | 0.785 | deleterious | D | 0.545178927 | None | None | N |
Y/E | 0.9662 | likely_pathogenic | 0.9716 | pathogenic | -2.833 | Highly Destabilizing | 0.986 | D | 0.685 | prob.neutral | None | None | None | None | N |
Y/F | 0.1527 | likely_benign | 0.158 | benign | -1.218 | Destabilizing | 0.969 | D | 0.528 | neutral | N | 0.487269977 | None | None | N |
Y/G | 0.9246 | likely_pathogenic | 0.9345 | pathogenic | -3.385 | Highly Destabilizing | 0.986 | D | 0.739 | prob.delet. | None | None | None | None | N |
Y/H | 0.4442 | ambiguous | 0.4826 | ambiguous | -2.049 | Highly Destabilizing | 0.046 | N | 0.351 | neutral | N | 0.504009717 | None | None | N |
Y/I | 0.7325 | likely_pathogenic | 0.7417 | pathogenic | -1.583 | Destabilizing | 0.993 | D | 0.74 | deleterious | None | None | None | None | N |
Y/K | 0.9384 | likely_pathogenic | 0.9477 | pathogenic | -2.192 | Highly Destabilizing | 0.986 | D | 0.725 | prob.delet. | None | None | None | None | N |
Y/L | 0.7776 | likely_pathogenic | 0.7915 | pathogenic | -1.583 | Destabilizing | 0.953 | D | 0.623 | neutral | None | None | None | None | N |
Y/M | 0.8521 | likely_pathogenic | 0.8667 | pathogenic | -1.511 | Destabilizing | 0.999 | D | 0.703 | prob.neutral | None | None | None | None | N |
Y/N | 0.6214 | likely_pathogenic | 0.6576 | pathogenic | -2.881 | Highly Destabilizing | 0.982 | D | 0.723 | prob.delet. | D | 0.544766555 | None | None | N |
Y/P | 0.9952 | likely_pathogenic | 0.9956 | pathogenic | -2.052 | Highly Destabilizing | 0.998 | D | 0.813 | deleterious | None | None | None | None | N |
Y/Q | 0.9115 | likely_pathogenic | 0.9254 | pathogenic | -2.664 | Highly Destabilizing | 0.986 | D | 0.737 | prob.delet. | None | None | None | None | N |
Y/R | 0.8664 | likely_pathogenic | 0.8831 | pathogenic | -1.879 | Destabilizing | 0.986 | D | 0.756 | deleterious | None | None | None | None | N |
Y/S | 0.8144 | likely_pathogenic | 0.8399 | pathogenic | -3.346 | Highly Destabilizing | 0.982 | D | 0.688 | prob.neutral | D | 0.54287588 | None | None | N |
Y/T | 0.8535 | likely_pathogenic | 0.8793 | pathogenic | -3.042 | Highly Destabilizing | 0.993 | D | 0.743 | deleterious | None | None | None | None | N |
Y/V | 0.6573 | likely_pathogenic | 0.6765 | pathogenic | -2.052 | Highly Destabilizing | 0.993 | D | 0.689 | prob.neutral | None | None | None | None | N |
Y/W | 0.6409 | likely_pathogenic | 0.6633 | pathogenic | -0.68 | Destabilizing | 0.999 | D | 0.645 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.