Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23131 | 69616;69617;69618 | chr2:178576944;178576943;178576942 | chr2:179441671;179441670;179441669 |
N2AB | 21490 | 64693;64694;64695 | chr2:178576944;178576943;178576942 | chr2:179441671;179441670;179441669 |
N2A | 20563 | 61912;61913;61914 | chr2:178576944;178576943;178576942 | chr2:179441671;179441670;179441669 |
N2B | 14066 | 42421;42422;42423 | chr2:178576944;178576943;178576942 | chr2:179441671;179441670;179441669 |
Novex-1 | 14191 | 42796;42797;42798 | chr2:178576944;178576943;178576942 | chr2:179441671;179441670;179441669 |
Novex-2 | 14258 | 42997;42998;42999 | chr2:178576944;178576943;178576942 | chr2:179441671;179441670;179441669 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | None | None | 0.049 | N | 0.289 | 0.076 | 0.39724302092 | gnomAD-4.0.0 | 2.74301E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.70259E-06 | 1.16618E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.3218 | likely_benign | 0.3049 | benign | -1.703 | Destabilizing | 0.792 | D | 0.513 | neutral | N | 0.488085866 | None | None | N |
V/C | 0.7574 | likely_pathogenic | 0.7569 | pathogenic | -1.092 | Destabilizing | 0.998 | D | 0.727 | deleterious | None | None | None | None | N |
V/D | 0.9004 | likely_pathogenic | 0.9066 | pathogenic | -1.825 | Destabilizing | 0.988 | D | 0.897 | deleterious | D | 0.546072389 | None | None | N |
V/E | 0.68 | likely_pathogenic | 0.672 | pathogenic | -1.708 | Destabilizing | 0.973 | D | 0.837 | deleterious | None | None | None | None | N |
V/F | 0.3276 | likely_benign | 0.3294 | benign | -1.071 | Destabilizing | 0.931 | D | 0.759 | deleterious | N | 0.514672818 | None | None | N |
V/G | 0.5157 | ambiguous | 0.5267 | ambiguous | -2.124 | Highly Destabilizing | 0.964 | D | 0.885 | deleterious | D | 0.545818899 | None | None | N |
V/H | 0.8585 | likely_pathogenic | 0.8603 | pathogenic | -1.564 | Destabilizing | 0.998 | D | 0.836 | deleterious | None | None | None | None | N |
V/I | 0.0846 | likely_benign | 0.0804 | benign | -0.589 | Destabilizing | 0.049 | N | 0.289 | neutral | N | 0.492343498 | None | None | N |
V/K | 0.6563 | likely_pathogenic | 0.6609 | pathogenic | -1.497 | Destabilizing | 0.947 | D | 0.825 | deleterious | None | None | None | None | N |
V/L | 0.2568 | likely_benign | 0.2217 | benign | -0.589 | Destabilizing | 0.214 | N | 0.435 | neutral | N | 0.502262874 | None | None | N |
V/M | 0.1835 | likely_benign | 0.1624 | benign | -0.478 | Destabilizing | 0.511 | D | 0.479 | neutral | None | None | None | None | N |
V/N | 0.7913 | likely_pathogenic | 0.7911 | pathogenic | -1.546 | Destabilizing | 0.973 | D | 0.885 | deleterious | None | None | None | None | N |
V/P | 0.9819 | likely_pathogenic | 0.9835 | pathogenic | -0.929 | Destabilizing | 0.991 | D | 0.818 | deleterious | None | None | None | None | N |
V/Q | 0.5848 | likely_pathogenic | 0.5729 | pathogenic | -1.559 | Destabilizing | 0.973 | D | 0.811 | deleterious | None | None | None | None | N |
V/R | 0.6031 | likely_pathogenic | 0.6168 | pathogenic | -1.084 | Destabilizing | 0.973 | D | 0.889 | deleterious | None | None | None | None | N |
V/S | 0.5546 | ambiguous | 0.5574 | ambiguous | -2.108 | Highly Destabilizing | 0.947 | D | 0.769 | deleterious | None | None | None | None | N |
V/T | 0.2952 | likely_benign | 0.2935 | benign | -1.862 | Destabilizing | 0.835 | D | 0.562 | neutral | None | None | None | None | N |
V/W | 0.9366 | likely_pathogenic | 0.9346 | pathogenic | -1.396 | Destabilizing | 0.998 | D | 0.804 | deleterious | None | None | None | None | N |
V/Y | 0.8106 | likely_pathogenic | 0.8191 | pathogenic | -1.047 | Destabilizing | 0.973 | D | 0.712 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.