Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23202 | 69829;69830;69831 | chr2:178576640;178576639;178576638 | chr2:179441367;179441366;179441365 |
N2AB | 21561 | 64906;64907;64908 | chr2:178576640;178576639;178576638 | chr2:179441367;179441366;179441365 |
N2A | 20634 | 62125;62126;62127 | chr2:178576640;178576639;178576638 | chr2:179441367;179441366;179441365 |
N2B | 14137 | 42634;42635;42636 | chr2:178576640;178576639;178576638 | chr2:179441367;179441366;179441365 |
Novex-1 | 14262 | 43009;43010;43011 | chr2:178576640;178576639;178576638 | chr2:179441367;179441366;179441365 |
Novex-2 | 14329 | 43210;43211;43212 | chr2:178576640;178576639;178576638 | chr2:179441367;179441366;179441365 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs2046496039 | None | 0.001 | N | 0.127 | 0.082 | 0.130388298395 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
T/A | rs2046496039 | None | 0.001 | N | 0.127 | 0.082 | 0.130388298395 | gnomAD-4.0.0 | 2.03007E-06 | None | None | None | None | N | None | 1.74709E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 1.20499E-06 | 0 | 0 |
T/I | None | None | 0.655 | N | 0.547 | 0.27 | 0.40528724903 | gnomAD-4.0.0 | 1.59161E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43291E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0855 | likely_benign | 0.093 | benign | -0.593 | Destabilizing | 0.001 | N | 0.127 | neutral | N | 0.505053719 | None | None | N |
T/C | 0.4242 | ambiguous | 0.4426 | ambiguous | -0.343 | Destabilizing | 0.951 | D | 0.481 | neutral | None | None | None | None | N |
T/D | 0.5253 | ambiguous | 0.5347 | ambiguous | 0.187 | Stabilizing | 0.418 | N | 0.432 | neutral | None | None | None | None | N |
T/E | 0.4412 | ambiguous | 0.4459 | ambiguous | 0.133 | Stabilizing | 0.129 | N | 0.419 | neutral | None | None | None | None | N |
T/F | 0.2857 | likely_benign | 0.2738 | benign | -0.922 | Destabilizing | 0.836 | D | 0.508 | neutral | None | None | None | None | N |
T/G | 0.2042 | likely_benign | 0.1991 | benign | -0.768 | Destabilizing | 0.129 | N | 0.395 | neutral | None | None | None | None | N |
T/H | 0.2908 | likely_benign | 0.2898 | benign | -1.022 | Destabilizing | 0.836 | D | 0.509 | neutral | None | None | None | None | N |
T/I | 0.1882 | likely_benign | 0.2079 | benign | -0.239 | Destabilizing | 0.655 | D | 0.547 | neutral | N | 0.484654555 | None | None | N |
T/K | 0.2784 | likely_benign | 0.274 | benign | -0.489 | Destabilizing | 0.213 | N | 0.443 | neutral | N | 0.478963195 | None | None | N |
T/L | 0.105 | likely_benign | 0.1051 | benign | -0.239 | Destabilizing | 0.264 | N | 0.441 | neutral | None | None | None | None | N |
T/M | 0.0935 | likely_benign | 0.0972 | benign | -0.006 | Destabilizing | 0.94 | D | 0.501 | neutral | None | None | None | None | N |
T/N | 0.1292 | likely_benign | 0.1357 | benign | -0.265 | Destabilizing | 0.264 | N | 0.314 | neutral | None | None | None | None | N |
T/P | 0.1035 | likely_benign | 0.1013 | benign | -0.327 | Destabilizing | 0.001 | N | 0.213 | neutral | N | 0.469055061 | None | None | N |
T/Q | 0.25 | likely_benign | 0.25 | benign | -0.493 | Destabilizing | 0.027 | N | 0.242 | neutral | None | None | None | None | N |
T/R | 0.2535 | likely_benign | 0.2589 | benign | -0.202 | Destabilizing | 0.351 | N | 0.504 | neutral | N | 0.515942716 | None | None | N |
T/S | 0.0998 | likely_benign | 0.1003 | benign | -0.548 | Destabilizing | 0.003 | N | 0.131 | neutral | N | 0.447389495 | None | None | N |
T/V | 0.1403 | likely_benign | 0.1492 | benign | -0.327 | Destabilizing | 0.264 | N | 0.322 | neutral | None | None | None | None | N |
T/W | 0.5973 | likely_pathogenic | 0.5974 | pathogenic | -0.862 | Destabilizing | 0.983 | D | 0.523 | neutral | None | None | None | None | N |
T/Y | 0.3256 | likely_benign | 0.3291 | benign | -0.614 | Destabilizing | 0.94 | D | 0.509 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.