Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2322 | 7189;7190;7191 | chr2:178774300;178774299;178774298 | chr2:179639027;179639026;179639025 |
N2AB | 2322 | 7189;7190;7191 | chr2:178774300;178774299;178774298 | chr2:179639027;179639026;179639025 |
N2A | 2322 | 7189;7190;7191 | chr2:178774300;178774299;178774298 | chr2:179639027;179639026;179639025 |
N2B | 2276 | 7051;7052;7053 | chr2:178774300;178774299;178774298 | chr2:179639027;179639026;179639025 |
Novex-1 | 2276 | 7051;7052;7053 | chr2:178774300;178774299;178774298 | chr2:179639027;179639026;179639025 |
Novex-2 | 2276 | 7051;7052;7053 | chr2:178774300;178774299;178774298 | chr2:179639027;179639026;179639025 |
Novex-3 | 2322 | 7189;7190;7191 | chr2:178774300;178774299;178774298 | chr2:179639027;179639026;179639025 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/I | rs1283394684 | 0.228 | 0.006 | N | 0.522 | 0.343 | 0.438806408302 | gnomAD-2.1.1 | 3.98E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.82E-06 | 0 |
N/I | rs1283394684 | 0.228 | 0.006 | N | 0.522 | 0.343 | 0.438806408302 | gnomAD-4.0.0 | 1.59057E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85675E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.1708 | likely_benign | 0.1762 | benign | -0.97 | Destabilizing | 0.176 | N | 0.487 | neutral | None | None | None | None | N |
N/C | 0.2155 | likely_benign | 0.2242 | benign | -0.452 | Destabilizing | 0.981 | D | 0.588 | neutral | None | None | None | None | N |
N/D | 0.2477 | likely_benign | 0.2556 | benign | -1.836 | Destabilizing | 0.425 | N | 0.415 | neutral | N | 0.477922482 | None | None | N |
N/E | 0.4239 | ambiguous | 0.4457 | ambiguous | -1.61 | Destabilizing | 0.495 | N | 0.403 | neutral | None | None | None | None | N |
N/F | 0.2839 | likely_benign | 0.2953 | benign | -0.612 | Destabilizing | 0.893 | D | 0.62 | neutral | None | None | None | None | N |
N/G | 0.2898 | likely_benign | 0.2968 | benign | -1.363 | Destabilizing | 0.495 | N | 0.397 | neutral | None | None | None | None | N |
N/H | 0.1073 | likely_benign | 0.1086 | benign | -1.026 | Destabilizing | 0.975 | D | 0.559 | neutral | N | 0.442889034 | None | None | N |
N/I | 0.0777 | likely_benign | 0.0793 | benign | 0.069 | Stabilizing | 0.006 | N | 0.522 | neutral | N | 0.395043653 | None | None | N |
N/K | 0.2892 | likely_benign | 0.3145 | benign | -0.166 | Destabilizing | 0.425 | N | 0.408 | neutral | N | 0.288038055 | None | None | N |
N/L | 0.1312 | likely_benign | 0.1384 | benign | 0.069 | Stabilizing | 0.329 | N | 0.509 | neutral | None | None | None | None | N |
N/M | 0.1645 | likely_benign | 0.1687 | benign | 0.265 | Stabilizing | 0.893 | D | 0.563 | neutral | None | None | None | None | N |
N/P | 0.9303 | likely_pathogenic | 0.9366 | pathogenic | -0.25 | Destabilizing | 0.828 | D | 0.577 | neutral | None | None | None | None | N |
N/Q | 0.2953 | likely_benign | 0.3126 | benign | -0.824 | Destabilizing | 0.828 | D | 0.522 | neutral | None | None | None | None | N |
N/R | 0.3407 | ambiguous | 0.3738 | ambiguous | -0.396 | Destabilizing | 0.828 | D | 0.48 | neutral | None | None | None | None | N |
N/S | 0.0835 | likely_benign | 0.0838 | benign | -1.129 | Destabilizing | 0.029 | N | 0.231 | neutral | N | 0.305676661 | None | None | N |
N/T | 0.0811 | likely_benign | 0.0847 | benign | -0.717 | Destabilizing | 0.003 | N | 0.171 | neutral | N | 0.36293696 | None | None | N |
N/V | 0.1063 | likely_benign | 0.1083 | benign | -0.25 | Destabilizing | 0.329 | N | 0.511 | neutral | None | None | None | None | N |
N/W | 0.663 | likely_pathogenic | 0.686 | pathogenic | -0.569 | Destabilizing | 0.995 | D | 0.618 | neutral | None | None | None | None | N |
N/Y | 0.1081 | likely_benign | 0.1111 | benign | -0.178 | Destabilizing | 0.975 | D | 0.573 | neutral | N | 0.418439716 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.