Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2325 | 7198;7199;7200 | chr2:178774291;178774290;178774289 | chr2:179639018;179639017;179639016 |
N2AB | 2325 | 7198;7199;7200 | chr2:178774291;178774290;178774289 | chr2:179639018;179639017;179639016 |
N2A | 2325 | 7198;7199;7200 | chr2:178774291;178774290;178774289 | chr2:179639018;179639017;179639016 |
N2B | 2279 | 7060;7061;7062 | chr2:178774291;178774290;178774289 | chr2:179639018;179639017;179639016 |
Novex-1 | 2279 | 7060;7061;7062 | chr2:178774291;178774290;178774289 | chr2:179639018;179639017;179639016 |
Novex-2 | 2279 | 7060;7061;7062 | chr2:178774291;178774290;178774289 | chr2:179639018;179639017;179639016 |
Novex-3 | 2325 | 7198;7199;7200 | chr2:178774291;178774290;178774289 | chr2:179639018;179639017;179639016 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/G | None | None | 0.997 | N | 0.877 | 0.727 | 0.920123548367 | gnomAD-4.0.0 | 1.59058E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85672E-06 | 0 | 0 |
V/I | None | None | 0.046 | N | 0.281 | 0.159 | 0.292423486923 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.8734 | likely_pathogenic | 0.8798 | pathogenic | -2.258 | Highly Destabilizing | 0.939 | D | 0.609 | neutral | N | 0.507688082 | None | None | N |
V/C | 0.9593 | likely_pathogenic | 0.963 | pathogenic | -1.79 | Destabilizing | 0.999 | D | 0.811 | deleterious | None | None | None | None | N |
V/D | 0.9979 | likely_pathogenic | 0.9983 | pathogenic | -3.015 | Highly Destabilizing | 0.997 | D | 0.877 | deleterious | N | 0.509190191 | None | None | N |
V/E | 0.9909 | likely_pathogenic | 0.9916 | pathogenic | -2.684 | Highly Destabilizing | 0.998 | D | 0.87 | deleterious | None | None | None | None | N |
V/F | 0.6643 | likely_pathogenic | 0.6796 | pathogenic | -1.31 | Destabilizing | 0.982 | D | 0.828 | deleterious | N | 0.511093416 | None | None | N |
V/G | 0.9608 | likely_pathogenic | 0.9651 | pathogenic | -2.899 | Highly Destabilizing | 0.997 | D | 0.877 | deleterious | N | 0.509190191 | None | None | N |
V/H | 0.9948 | likely_pathogenic | 0.9953 | pathogenic | -2.855 | Highly Destabilizing | 0.999 | D | 0.878 | deleterious | None | None | None | None | N |
V/I | 0.074 | likely_benign | 0.0772 | benign | -0.397 | Destabilizing | 0.046 | N | 0.281 | neutral | N | 0.331040381 | None | None | N |
V/K | 0.9893 | likely_pathogenic | 0.9895 | pathogenic | -1.743 | Destabilizing | 0.993 | D | 0.871 | deleterious | None | None | None | None | N |
V/L | 0.3871 | ambiguous | 0.4097 | ambiguous | -0.397 | Destabilizing | 0.76 | D | 0.509 | neutral | N | 0.49358547 | None | None | N |
V/M | 0.4516 | ambiguous | 0.4694 | ambiguous | -0.692 | Destabilizing | 0.986 | D | 0.707 | prob.neutral | None | None | None | None | N |
V/N | 0.99 | likely_pathogenic | 0.9917 | pathogenic | -2.43 | Highly Destabilizing | 0.998 | D | 0.901 | deleterious | None | None | None | None | N |
V/P | 0.9954 | likely_pathogenic | 0.9963 | pathogenic | -0.997 | Destabilizing | 0.998 | D | 0.877 | deleterious | None | None | None | None | N |
V/Q | 0.9872 | likely_pathogenic | 0.9881 | pathogenic | -2.034 | Highly Destabilizing | 0.998 | D | 0.897 | deleterious | None | None | None | None | N |
V/R | 0.9827 | likely_pathogenic | 0.9836 | pathogenic | -1.942 | Destabilizing | 0.998 | D | 0.901 | deleterious | None | None | None | None | N |
V/S | 0.9712 | likely_pathogenic | 0.9749 | pathogenic | -3.011 | Highly Destabilizing | 0.993 | D | 0.869 | deleterious | None | None | None | None | N |
V/T | 0.933 | likely_pathogenic | 0.9371 | pathogenic | -2.502 | Highly Destabilizing | 0.953 | D | 0.719 | prob.delet. | None | None | None | None | N |
V/W | 0.9939 | likely_pathogenic | 0.9946 | pathogenic | -1.856 | Destabilizing | 0.999 | D | 0.87 | deleterious | None | None | None | None | N |
V/Y | 0.9734 | likely_pathogenic | 0.9758 | pathogenic | -1.502 | Destabilizing | 0.998 | D | 0.823 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.