Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23265 | 70018;70019;70020 | chr2:178576339;178576338;178576337 | chr2:179441066;179441065;179441064 |
N2AB | 21624 | 65095;65096;65097 | chr2:178576339;178576338;178576337 | chr2:179441066;179441065;179441064 |
N2A | 20697 | 62314;62315;62316 | chr2:178576339;178576338;178576337 | chr2:179441066;179441065;179441064 |
N2B | 14200 | 42823;42824;42825 | chr2:178576339;178576338;178576337 | chr2:179441066;179441065;179441064 |
Novex-1 | 14325 | 43198;43199;43200 | chr2:178576339;178576338;178576337 | chr2:179441066;179441065;179441064 |
Novex-2 | 14392 | 43399;43400;43401 | chr2:178576339;178576338;178576337 | chr2:179441066;179441065;179441064 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/Y | rs1265649343 | 0.929 | 0.521 | N | 0.397 | 0.26 | 0.197625483188 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 6.48E-05 | 0 |
H/Y | rs1265649343 | 0.929 | 0.521 | N | 0.397 | 0.26 | 0.197625483188 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
H/Y | rs1265649343 | 0.929 | 0.521 | N | 0.397 | 0.26 | 0.197625483188 | gnomAD-4.0.0 | 6.57626E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47076E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.3213 | likely_benign | 0.3871 | ambiguous | 0.362 | Stabilizing | 0.373 | N | 0.367 | neutral | None | None | None | None | I |
H/C | 0.2601 | likely_benign | 0.2551 | benign | 0.522 | Stabilizing | 0.996 | D | 0.351 | neutral | None | None | None | None | I |
H/D | 0.4878 | ambiguous | 0.5811 | pathogenic | -0.05 | Destabilizing | 0.684 | D | 0.42 | neutral | N | 0.353284468 | None | None | I |
H/E | 0.5541 | ambiguous | 0.6415 | pathogenic | -0.052 | Destabilizing | 0.742 | D | 0.366 | neutral | None | None | None | None | I |
H/F | 0.288 | likely_benign | 0.2933 | benign | 0.82 | Stabilizing | 0.009 | N | 0.257 | neutral | None | None | None | None | I |
H/G | 0.4669 | ambiguous | 0.5427 | ambiguous | 0.146 | Stabilizing | 0.742 | D | 0.447 | neutral | None | None | None | None | I |
H/I | 0.2585 | likely_benign | 0.3117 | benign | 0.885 | Stabilizing | 0.91 | D | 0.399 | neutral | None | None | None | None | I |
H/K | 0.4547 | ambiguous | 0.5211 | ambiguous | 0.281 | Stabilizing | 0.59 | D | 0.433 | neutral | None | None | None | None | I |
H/L | 0.121 | likely_benign | 0.1456 | benign | 0.885 | Stabilizing | 0.521 | D | 0.461 | neutral | N | 0.343299548 | None | None | I |
H/M | 0.4355 | ambiguous | 0.4906 | ambiguous | 0.613 | Stabilizing | 0.984 | D | 0.375 | neutral | None | None | None | None | I |
H/N | 0.1595 | likely_benign | 0.2093 | benign | 0.22 | Stabilizing | 0.684 | D | 0.404 | neutral | N | 0.431014533 | None | None | I |
H/P | 0.2429 | likely_benign | 0.2947 | benign | 0.734 | Stabilizing | 0.939 | D | 0.423 | neutral | N | 0.391360067 | None | None | I |
H/Q | 0.2876 | likely_benign | 0.3577 | ambiguous | 0.265 | Stabilizing | 0.884 | D | 0.349 | neutral | N | 0.405156083 | None | None | I |
H/R | 0.2025 | likely_benign | 0.241 | benign | -0.143 | Destabilizing | 0.007 | N | 0.225 | neutral | N | 0.388935837 | None | None | I |
H/S | 0.2842 | likely_benign | 0.3569 | ambiguous | 0.286 | Stabilizing | 0.101 | N | 0.251 | neutral | None | None | None | None | I |
H/T | 0.3743 | ambiguous | 0.4431 | ambiguous | 0.376 | Stabilizing | 0.59 | D | 0.455 | neutral | None | None | None | None | I |
H/V | 0.2271 | likely_benign | 0.2757 | benign | 0.734 | Stabilizing | 0.742 | D | 0.421 | neutral | None | None | None | None | I |
H/W | 0.4752 | ambiguous | 0.4629 | ambiguous | 0.724 | Stabilizing | 0.996 | D | 0.381 | neutral | None | None | None | None | I |
H/Y | 0.1097 | likely_benign | 0.1211 | benign | 1.015 | Stabilizing | 0.521 | D | 0.397 | neutral | N | 0.437633861 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.