Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23266 | 70021;70022;70023 | chr2:178576336;178576335;178576334 | chr2:179441063;179441062;179441061 |
N2AB | 21625 | 65098;65099;65100 | chr2:178576336;178576335;178576334 | chr2:179441063;179441062;179441061 |
N2A | 20698 | 62317;62318;62319 | chr2:178576336;178576335;178576334 | chr2:179441063;179441062;179441061 |
N2B | 14201 | 42826;42827;42828 | chr2:178576336;178576335;178576334 | chr2:179441063;179441062;179441061 |
Novex-1 | 14326 | 43201;43202;43203 | chr2:178576336;178576335;178576334 | chr2:179441063;179441062;179441061 |
Novex-2 | 14393 | 43402;43403;43404 | chr2:178576336;178576335;178576334 | chr2:179441063;179441062;179441061 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/S | None | None | 0.967 | N | 0.582 | 0.486 | 0.344945010812 | gnomAD-4.0.0 | 1.71684E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.01448E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.8804 | likely_pathogenic | 0.8082 | pathogenic | -0.789 | Destabilizing | 0.916 | D | 0.505 | neutral | None | None | None | None | I |
Y/C | 0.5157 | ambiguous | 0.3955 | ambiguous | 0.136 | Stabilizing | 0.999 | D | 0.667 | neutral | N | 0.464755285 | None | None | I |
Y/D | 0.7044 | likely_pathogenic | 0.5374 | ambiguous | 0.946 | Stabilizing | 0.967 | D | 0.657 | neutral | N | 0.395685664 | None | None | I |
Y/E | 0.9385 | likely_pathogenic | 0.8881 | pathogenic | 0.929 | Stabilizing | 0.975 | D | 0.548 | neutral | None | None | None | None | I |
Y/F | 0.2053 | likely_benign | 0.1948 | benign | -0.394 | Destabilizing | 0.944 | D | 0.525 | neutral | N | 0.483267363 | None | None | I |
Y/G | 0.7918 | likely_pathogenic | 0.6933 | pathogenic | -0.987 | Destabilizing | 0.975 | D | 0.589 | neutral | None | None | None | None | I |
Y/H | 0.6069 | likely_pathogenic | 0.4814 | ambiguous | 0.144 | Stabilizing | 0.056 | N | 0.264 | neutral | N | 0.423565699 | None | None | I |
Y/I | 0.8783 | likely_pathogenic | 0.8334 | pathogenic | -0.287 | Destabilizing | 0.987 | D | 0.635 | neutral | None | None | None | None | I |
Y/K | 0.9052 | likely_pathogenic | 0.8562 | pathogenic | 0.206 | Stabilizing | 0.975 | D | 0.627 | neutral | None | None | None | None | I |
Y/L | 0.8241 | likely_pathogenic | 0.774 | pathogenic | -0.287 | Destabilizing | 0.916 | D | 0.563 | neutral | None | None | None | None | I |
Y/M | 0.8986 | likely_pathogenic | 0.8527 | pathogenic | -0.066 | Destabilizing | 0.999 | D | 0.627 | neutral | None | None | None | None | I |
Y/N | 0.5858 | likely_pathogenic | 0.4274 | ambiguous | 0.068 | Stabilizing | 0.967 | D | 0.637 | neutral | N | 0.447114562 | None | None | I |
Y/P | 0.9853 | likely_pathogenic | 0.9806 | pathogenic | -0.435 | Destabilizing | 0.996 | D | 0.678 | prob.neutral | None | None | None | None | I |
Y/Q | 0.8926 | likely_pathogenic | 0.8233 | pathogenic | 0.084 | Stabilizing | 0.975 | D | 0.639 | neutral | None | None | None | None | I |
Y/R | 0.7963 | likely_pathogenic | 0.7135 | pathogenic | 0.503 | Stabilizing | 0.975 | D | 0.64 | neutral | None | None | None | None | I |
Y/S | 0.6016 | likely_pathogenic | 0.4272 | ambiguous | -0.411 | Destabilizing | 0.967 | D | 0.582 | neutral | N | 0.434107979 | None | None | I |
Y/T | 0.8379 | likely_pathogenic | 0.7408 | pathogenic | -0.338 | Destabilizing | 0.987 | D | 0.635 | neutral | None | None | None | None | I |
Y/V | 0.7874 | likely_pathogenic | 0.7113 | pathogenic | -0.435 | Destabilizing | 0.987 | D | 0.551 | neutral | None | None | None | None | I |
Y/W | 0.6414 | likely_pathogenic | 0.6052 | pathogenic | -0.465 | Destabilizing | 0.999 | D | 0.615 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.