Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23282 | 70069;70070;70071 | chr2:178576288;178576287;178576286 | chr2:179441015;179441014;179441013 |
N2AB | 21641 | 65146;65147;65148 | chr2:178576288;178576287;178576286 | chr2:179441015;179441014;179441013 |
N2A | 20714 | 62365;62366;62367 | chr2:178576288;178576287;178576286 | chr2:179441015;179441014;179441013 |
N2B | 14217 | 42874;42875;42876 | chr2:178576288;178576287;178576286 | chr2:179441015;179441014;179441013 |
Novex-1 | 14342 | 43249;43250;43251 | chr2:178576288;178576287;178576286 | chr2:179441015;179441014;179441013 |
Novex-2 | 14409 | 43450;43451;43452 | chr2:178576288;178576287;178576286 | chr2:179441015;179441014;179441013 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs876658079 | None | 0.081 | N | 0.319 | 0.167 | 0.38225645794 | gnomAD-4.0.0 | 2.76242E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.61581E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.0607 | likely_benign | 0.0607 | benign | -1.545 | Destabilizing | None | N | 0.138 | neutral | N | 0.465993898 | None | None | N |
V/C | 0.5604 | ambiguous | 0.5736 | pathogenic | -0.954 | Destabilizing | 0.883 | D | 0.452 | neutral | None | None | None | None | N |
V/D | 0.1542 | likely_benign | 0.1667 | benign | -1.4 | Destabilizing | 0.055 | N | 0.525 | neutral | None | None | None | None | N |
V/E | 0.1065 | likely_benign | 0.1143 | benign | -1.42 | Destabilizing | None | N | 0.259 | neutral | N | 0.417162588 | None | None | N |
V/F | 0.1838 | likely_benign | 0.193 | benign | -1.29 | Destabilizing | 0.667 | D | 0.479 | neutral | None | None | None | None | N |
V/G | 0.1119 | likely_benign | 0.1166 | benign | -1.846 | Destabilizing | 0.042 | N | 0.532 | neutral | N | 0.476808325 | None | None | N |
V/H | 0.3516 | ambiguous | 0.3691 | ambiguous | -1.333 | Destabilizing | 0.667 | D | 0.567 | neutral | None | None | None | None | N |
V/I | 0.0803 | likely_benign | 0.079 | benign | -0.82 | Destabilizing | 0.081 | N | 0.319 | neutral | N | 0.478616479 | None | None | N |
V/K | 0.144 | likely_benign | 0.158 | benign | -1.184 | Destabilizing | 0.055 | N | 0.529 | neutral | None | None | None | None | N |
V/L | 0.1489 | likely_benign | 0.15 | benign | -0.82 | Destabilizing | 0.042 | N | 0.305 | neutral | N | 0.474960098 | None | None | N |
V/M | 0.1191 | likely_benign | 0.1231 | benign | -0.541 | Destabilizing | 0.859 | D | 0.399 | neutral | None | None | None | None | N |
V/N | 0.139 | likely_benign | 0.1416 | benign | -0.925 | Destabilizing | 0.22 | N | 0.556 | neutral | None | None | None | None | N |
V/P | 0.2089 | likely_benign | 0.2232 | benign | -1.027 | Destabilizing | 0.364 | N | 0.55 | neutral | None | None | None | None | N |
V/Q | 0.151 | likely_benign | 0.1616 | benign | -1.151 | Destabilizing | 0.124 | N | 0.535 | neutral | None | None | None | None | N |
V/R | 0.1535 | likely_benign | 0.1669 | benign | -0.601 | Destabilizing | 0.22 | N | 0.555 | neutral | None | None | None | None | N |
V/S | 0.0939 | likely_benign | 0.0935 | benign | -1.441 | Destabilizing | 0.055 | N | 0.504 | neutral | None | None | None | None | N |
V/T | 0.0802 | likely_benign | 0.0786 | benign | -1.357 | Destabilizing | 0.104 | N | 0.263 | neutral | None | None | None | None | N |
V/W | 0.7035 | likely_pathogenic | 0.7342 | pathogenic | -1.44 | Destabilizing | 0.958 | D | 0.569 | neutral | None | None | None | None | N |
V/Y | 0.4184 | ambiguous | 0.4365 | ambiguous | -1.171 | Destabilizing | 0.859 | D | 0.478 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.