Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23284 | 70075;70076;70077 | chr2:178576282;178576281;178576280 | chr2:179441009;179441008;179441007 |
N2AB | 21643 | 65152;65153;65154 | chr2:178576282;178576281;178576280 | chr2:179441009;179441008;179441007 |
N2A | 20716 | 62371;62372;62373 | chr2:178576282;178576281;178576280 | chr2:179441009;179441008;179441007 |
N2B | 14219 | 42880;42881;42882 | chr2:178576282;178576281;178576280 | chr2:179441009;179441008;179441007 |
Novex-1 | 14344 | 43255;43256;43257 | chr2:178576282;178576281;178576280 | chr2:179441009;179441008;179441007 |
Novex-2 | 14411 | 43456;43457;43458 | chr2:178576282;178576281;178576280 | chr2:179441009;179441008;179441007 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/V | rs768131129 | 0.283 | 0.317 | N | 0.431 | 0.33 | 0.408853032482 | gnomAD-2.1.1 | 4.22E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 9.31E-06 | 0 |
D/V | rs768131129 | 0.283 | 0.317 | N | 0.431 | 0.33 | 0.408853032482 | gnomAD-4.0.0 | 4.85197E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.67624E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1004 | likely_benign | 0.0986 | benign | -0.108 | Destabilizing | 0.062 | N | 0.31 | neutral | N | 0.444501118 | None | None | N |
D/C | 0.3632 | ambiguous | 0.3531 | ambiguous | 0.152 | Stabilizing | 0.935 | D | 0.507 | neutral | None | None | None | None | N |
D/E | 0.0762 | likely_benign | 0.077 | benign | -0.238 | Destabilizing | None | N | 0.185 | neutral | N | 0.412503343 | None | None | N |
D/F | 0.4358 | ambiguous | 0.4308 | ambiguous | -0.221 | Destabilizing | 0.555 | D | 0.453 | neutral | None | None | None | None | N |
D/G | 0.1087 | likely_benign | 0.1047 | benign | -0.267 | Destabilizing | 0.117 | N | 0.259 | neutral | N | 0.416274367 | None | None | N |
D/H | 0.1746 | likely_benign | 0.1689 | benign | -0.018 | Destabilizing | None | N | 0.289 | neutral | N | 0.505722935 | None | None | N |
D/I | 0.2389 | likely_benign | 0.2346 | benign | 0.25 | Stabilizing | 0.555 | D | 0.452 | neutral | None | None | None | None | N |
D/K | 0.1648 | likely_benign | 0.1667 | benign | 0.433 | Stabilizing | 0.081 | N | 0.259 | neutral | None | None | None | None | N |
D/L | 0.2137 | likely_benign | 0.2107 | benign | 0.25 | Stabilizing | 0.38 | N | 0.427 | neutral | None | None | None | None | N |
D/M | 0.336 | likely_benign | 0.3326 | benign | 0.328 | Stabilizing | 0.935 | D | 0.464 | neutral | None | None | None | None | N |
D/N | 0.0776 | likely_benign | 0.0762 | benign | 0.279 | Stabilizing | 0.117 | N | 0.297 | neutral | N | 0.457736987 | None | None | N |
D/P | 0.6891 | likely_pathogenic | 0.6689 | pathogenic | 0.152 | Stabilizing | 0.555 | D | 0.328 | neutral | None | None | None | None | N |
D/Q | 0.1503 | likely_benign | 0.1488 | benign | 0.277 | Stabilizing | 0.081 | N | 0.279 | neutral | None | None | None | None | N |
D/R | 0.2213 | likely_benign | 0.2174 | benign | 0.538 | Stabilizing | 0.235 | N | 0.385 | neutral | None | None | None | None | N |
D/S | 0.0758 | likely_benign | 0.075 | benign | 0.16 | Stabilizing | 0.081 | N | 0.253 | neutral | None | None | None | None | N |
D/T | 0.1171 | likely_benign | 0.1145 | benign | 0.277 | Stabilizing | 0.149 | N | 0.298 | neutral | None | None | None | None | N |
D/V | 0.1303 | likely_benign | 0.1295 | benign | 0.152 | Stabilizing | 0.317 | N | 0.431 | neutral | N | 0.471495718 | None | None | N |
D/W | 0.7671 | likely_pathogenic | 0.7617 | pathogenic | -0.163 | Destabilizing | 0.935 | D | 0.553 | neutral | None | None | None | None | N |
D/Y | 0.1869 | likely_benign | 0.185 | benign | 0.004 | Stabilizing | 0.317 | N | 0.453 | neutral | N | 0.471747178 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.