Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23300 | 70123;70124;70125 | chr2:178576234;178576233;178576232 | chr2:179440961;179440960;179440959 |
N2AB | 21659 | 65200;65201;65202 | chr2:178576234;178576233;178576232 | chr2:179440961;179440960;179440959 |
N2A | 20732 | 62419;62420;62421 | chr2:178576234;178576233;178576232 | chr2:179440961;179440960;179440959 |
N2B | 14235 | 42928;42929;42930 | chr2:178576234;178576233;178576232 | chr2:179440961;179440960;179440959 |
Novex-1 | 14360 | 43303;43304;43305 | chr2:178576234;178576233;178576232 | chr2:179440961;179440960;179440959 |
Novex-2 | 14427 | 43504;43505;43506 | chr2:178576234;178576233;178576232 | chr2:179440961;179440960;179440959 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/L | None | None | 0.024 | N | 0.467 | 0.245 | 0.308278614506 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.2079 | likely_benign | 0.2195 | benign | -0.5 | Destabilizing | 0.007 | N | 0.339 | neutral | None | None | None | None | I |
Q/C | 0.6884 | likely_pathogenic | 0.6809 | pathogenic | -0.099 | Destabilizing | 0.864 | D | 0.546 | neutral | None | None | None | None | I |
Q/D | 0.3228 | likely_benign | 0.3489 | ambiguous | -0.099 | Destabilizing | None | N | 0.217 | neutral | None | None | None | None | I |
Q/E | 0.0545 | likely_benign | 0.0578 | benign | 0.013 | Stabilizing | None | N | 0.172 | neutral | N | 0.356402131 | None | None | I |
Q/F | 0.8442 | likely_pathogenic | 0.8485 | pathogenic | -0.275 | Destabilizing | 0.628 | D | 0.552 | neutral | None | None | None | None | I |
Q/G | 0.3021 | likely_benign | 0.323 | benign | -0.831 | Destabilizing | 0.031 | N | 0.411 | neutral | None | None | None | None | I |
Q/H | 0.2208 | likely_benign | 0.2119 | benign | -0.37 | Destabilizing | 0.295 | N | 0.436 | neutral | N | 0.45789449 | None | None | I |
Q/I | 0.5947 | likely_pathogenic | 0.5916 | pathogenic | 0.338 | Stabilizing | 0.356 | N | 0.596 | neutral | None | None | None | None | I |
Q/K | 0.126 | likely_benign | 0.1247 | benign | -0.037 | Destabilizing | None | N | 0.191 | neutral | N | 0.436287067 | None | None | I |
Q/L | 0.2644 | likely_benign | 0.2774 | benign | 0.338 | Stabilizing | 0.024 | N | 0.467 | neutral | N | 0.493719217 | None | None | I |
Q/M | 0.4657 | ambiguous | 0.4659 | ambiguous | 0.382 | Stabilizing | 0.628 | D | 0.443 | neutral | None | None | None | None | I |
Q/N | 0.2463 | likely_benign | 0.2553 | benign | -0.706 | Destabilizing | 0.031 | N | 0.329 | neutral | None | None | None | None | I |
Q/P | 0.7496 | likely_pathogenic | 0.7715 | pathogenic | 0.089 | Stabilizing | 0.106 | N | 0.46 | neutral | N | 0.478096404 | None | None | I |
Q/R | 0.132 | likely_benign | 0.1334 | benign | 0.066 | Stabilizing | 0.012 | N | 0.344 | neutral | N | 0.437940505 | None | None | I |
Q/S | 0.1842 | likely_benign | 0.1931 | benign | -0.827 | Destabilizing | 0.007 | N | 0.297 | neutral | None | None | None | None | I |
Q/T | 0.1766 | likely_benign | 0.1746 | benign | -0.514 | Destabilizing | 0.031 | N | 0.399 | neutral | None | None | None | None | I |
Q/V | 0.3401 | ambiguous | 0.3369 | benign | 0.089 | Stabilizing | 0.072 | N | 0.511 | neutral | None | None | None | None | I |
Q/W | 0.7475 | likely_pathogenic | 0.7452 | pathogenic | -0.184 | Destabilizing | 0.864 | D | 0.57 | neutral | None | None | None | None | I |
Q/Y | 0.5495 | ambiguous | 0.5534 | ambiguous | 0.083 | Stabilizing | 0.628 | D | 0.565 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.