Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23311 | 70156;70157;70158 | chr2:178576201;178576200;178576199 | chr2:179440928;179440927;179440926 |
N2AB | 21670 | 65233;65234;65235 | chr2:178576201;178576200;178576199 | chr2:179440928;179440927;179440926 |
N2A | 20743 | 62452;62453;62454 | chr2:178576201;178576200;178576199 | chr2:179440928;179440927;179440926 |
N2B | 14246 | 42961;42962;42963 | chr2:178576201;178576200;178576199 | chr2:179440928;179440927;179440926 |
Novex-1 | 14371 | 43336;43337;43338 | chr2:178576201;178576200;178576199 | chr2:179440928;179440927;179440926 |
Novex-2 | 14438 | 43537;43538;43539 | chr2:178576201;178576200;178576199 | chr2:179440928;179440927;179440926 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | rs1025638052 | None | 0.892 | N | 0.471 | 0.26 | 0.354396617058 | gnomAD-4.0.0 | 1.59333E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.02828E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.3537 | ambiguous | 0.3413 | ambiguous | -0.97 | Destabilizing | 0.845 | D | 0.549 | neutral | None | None | None | None | N |
K/C | 0.5845 | likely_pathogenic | 0.5544 | ambiguous | -1.047 | Destabilizing | 0.999 | D | 0.76 | deleterious | None | None | None | None | N |
K/D | 0.6458 | likely_pathogenic | 0.6358 | pathogenic | -0.724 | Destabilizing | 0.975 | D | 0.75 | deleterious | None | None | None | None | N |
K/E | 0.2368 | likely_benign | 0.2338 | benign | -0.527 | Destabilizing | 0.892 | D | 0.46 | neutral | N | 0.385588887 | None | None | N |
K/F | 0.7074 | likely_pathogenic | 0.6859 | pathogenic | -0.34 | Destabilizing | 0.987 | D | 0.792 | deleterious | None | None | None | None | N |
K/G | 0.4896 | ambiguous | 0.4669 | ambiguous | -1.416 | Destabilizing | 0.975 | D | 0.719 | prob.delet. | None | None | None | None | N |
K/H | 0.2946 | likely_benign | 0.2741 | benign | -1.603 | Destabilizing | 0.999 | D | 0.768 | deleterious | None | None | None | None | N |
K/I | 0.2738 | likely_benign | 0.2783 | benign | 0.236 | Stabilizing | 0.967 | D | 0.794 | deleterious | N | 0.516481434 | None | None | N |
K/L | 0.3194 | likely_benign | 0.3147 | benign | 0.236 | Stabilizing | 0.845 | D | 0.663 | neutral | None | None | None | None | N |
K/M | 0.1711 | likely_benign | 0.1674 | benign | 0.014 | Stabilizing | 0.999 | D | 0.768 | deleterious | None | None | None | None | N |
K/N | 0.3585 | ambiguous | 0.3458 | ambiguous | -1.169 | Destabilizing | 0.967 | D | 0.658 | neutral | N | 0.497335525 | None | None | N |
K/P | 0.6306 | likely_pathogenic | 0.6203 | pathogenic | -0.138 | Destabilizing | 0.987 | D | 0.8 | deleterious | None | None | None | None | N |
K/Q | 0.1469 | likely_benign | 0.1413 | benign | -1.061 | Destabilizing | 0.983 | D | 0.666 | neutral | N | 0.473439945 | None | None | N |
K/R | 0.088 | likely_benign | 0.0858 | benign | -0.971 | Destabilizing | 0.892 | D | 0.471 | neutral | N | 0.48581181 | None | None | N |
K/S | 0.3951 | ambiguous | 0.3839 | ambiguous | -1.819 | Destabilizing | 0.845 | D | 0.463 | neutral | None | None | None | None | N |
K/T | 0.135 | likely_benign | 0.1339 | benign | -1.384 | Destabilizing | 0.025 | N | 0.382 | neutral | N | 0.464281744 | None | None | N |
K/V | 0.2769 | likely_benign | 0.2789 | benign | -0.138 | Destabilizing | 0.95 | D | 0.713 | prob.delet. | None | None | None | None | N |
K/W | 0.7231 | likely_pathogenic | 0.7114 | pathogenic | -0.25 | Destabilizing | 0.999 | D | 0.744 | deleterious | None | None | None | None | N |
K/Y | 0.5712 | likely_pathogenic | 0.5422 | ambiguous | 0.04 | Stabilizing | 0.996 | D | 0.783 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.