Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23330 | 70213;70214;70215 | chr2:178576144;178576143;178576142 | chr2:179440871;179440870;179440869 |
N2AB | 21689 | 65290;65291;65292 | chr2:178576144;178576143;178576142 | chr2:179440871;179440870;179440869 |
N2A | 20762 | 62509;62510;62511 | chr2:178576144;178576143;178576142 | chr2:179440871;179440870;179440869 |
N2B | 14265 | 43018;43019;43020 | chr2:178576144;178576143;178576142 | chr2:179440871;179440870;179440869 |
Novex-1 | 14390 | 43393;43394;43395 | chr2:178576144;178576143;178576142 | chr2:179440871;179440870;179440869 |
Novex-2 | 14457 | 43594;43595;43596 | chr2:178576144;178576143;178576142 | chr2:179440871;179440870;179440869 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | rs1211020644 | -2.885 | 0.682 | N | 0.76 | 0.254 | 0.665944241059 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
I/T | rs1211020644 | -2.885 | 0.682 | N | 0.76 | 0.254 | 0.665944241059 | gnomAD-4.0.0 | 1.59211E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.4339E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.6786 | likely_pathogenic | 0.7116 | pathogenic | -2.13 | Highly Destabilizing | 0.37 | N | 0.742 | deleterious | None | None | None | None | N |
I/C | 0.772 | likely_pathogenic | 0.7749 | pathogenic | -1.296 | Destabilizing | 0.996 | D | 0.707 | prob.delet. | None | None | None | None | N |
I/D | 0.9393 | likely_pathogenic | 0.9426 | pathogenic | -2.187 | Highly Destabilizing | 0.984 | D | 0.83 | deleterious | None | None | None | None | N |
I/E | 0.8803 | likely_pathogenic | 0.8807 | pathogenic | -2.0 | Highly Destabilizing | 0.953 | D | 0.804 | deleterious | None | None | None | None | N |
I/F | 0.2873 | likely_benign | 0.2751 | benign | -1.222 | Destabilizing | 0.883 | D | 0.748 | deleterious | N | 0.447955216 | None | None | N |
I/G | 0.9101 | likely_pathogenic | 0.9122 | pathogenic | -2.63 | Highly Destabilizing | 0.953 | D | 0.752 | deleterious | None | None | None | None | N |
I/H | 0.8074 | likely_pathogenic | 0.8001 | pathogenic | -1.98 | Destabilizing | 0.996 | D | 0.839 | deleterious | None | None | None | None | N |
I/K | 0.7894 | likely_pathogenic | 0.7886 | pathogenic | -1.678 | Destabilizing | 0.953 | D | 0.805 | deleterious | None | None | None | None | N |
I/L | 0.1124 | likely_benign | 0.1116 | benign | -0.719 | Destabilizing | 0.162 | N | 0.433 | neutral | N | 0.4208059 | None | None | N |
I/M | 0.1454 | likely_benign | 0.1463 | benign | -0.561 | Destabilizing | 0.938 | D | 0.709 | prob.delet. | N | 0.440413168 | None | None | N |
I/N | 0.6082 | likely_pathogenic | 0.6117 | pathogenic | -1.9 | Destabilizing | 0.979 | D | 0.831 | deleterious | D | 0.522047543 | None | None | N |
I/P | 0.9515 | likely_pathogenic | 0.9508 | pathogenic | -1.167 | Destabilizing | 0.984 | D | 0.815 | deleterious | None | None | None | None | N |
I/Q | 0.7892 | likely_pathogenic | 0.7821 | pathogenic | -1.815 | Destabilizing | 0.984 | D | 0.832 | deleterious | None | None | None | None | N |
I/R | 0.7518 | likely_pathogenic | 0.7437 | pathogenic | -1.349 | Destabilizing | 0.953 | D | 0.83 | deleterious | None | None | None | None | N |
I/S | 0.6292 | likely_pathogenic | 0.6356 | pathogenic | -2.567 | Highly Destabilizing | 0.883 | D | 0.761 | deleterious | N | 0.448357861 | None | None | N |
I/T | 0.4777 | ambiguous | 0.5079 | ambiguous | -2.237 | Highly Destabilizing | 0.682 | D | 0.76 | deleterious | N | 0.405895163 | None | None | N |
I/V | 0.1199 | likely_benign | 0.1313 | benign | -1.167 | Destabilizing | 0.001 | N | 0.175 | neutral | N | 0.426846438 | None | None | N |
I/W | 0.9061 | likely_pathogenic | 0.9027 | pathogenic | -1.564 | Destabilizing | 0.996 | D | 0.837 | deleterious | None | None | None | None | N |
I/Y | 0.7252 | likely_pathogenic | 0.7107 | pathogenic | -1.242 | Destabilizing | 0.953 | D | 0.753 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.