Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23349 | 70270;70271;70272 | chr2:178576087;178576086;178576085 | chr2:179440814;179440813;179440812 |
N2AB | 21708 | 65347;65348;65349 | chr2:178576087;178576086;178576085 | chr2:179440814;179440813;179440812 |
N2A | 20781 | 62566;62567;62568 | chr2:178576087;178576086;178576085 | chr2:179440814;179440813;179440812 |
N2B | 14284 | 43075;43076;43077 | chr2:178576087;178576086;178576085 | chr2:179440814;179440813;179440812 |
Novex-1 | 14409 | 43450;43451;43452 | chr2:178576087;178576086;178576085 | chr2:179440814;179440813;179440812 |
Novex-2 | 14476 | 43651;43652;43653 | chr2:178576087;178576086;178576085 | chr2:179440814;179440813;179440812 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs774136558 | -0.159 | 0.025 | N | 0.363 | 0.064 | 0.21737058555 | gnomAD-2.1.1 | 3.57E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 5.1435E-04 | None | 0 | None | 0 | 0 | 0 |
E/D | rs774136558 | -0.159 | 0.025 | N | 0.363 | 0.064 | 0.21737058555 | gnomAD-3.1.2 | 1.32E-05 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 3.87297E-04 | None | 0 | 0 | 0 | 0 | 0 |
E/D | rs774136558 | -0.159 | 0.025 | N | 0.363 | 0.064 | 0.21737058555 | gnomAD-4.0.0 | 5.57836E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.00857E-04 | None | 0 | 0 | 0 | 0 | 0 |
E/K | rs397517682 | 0.673 | 0.979 | N | 0.536 | 0.313 | None | gnomAD-2.1.1 | 1.07E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 5.15E-05 | None | 3.27E-05 | None | 0 | 7.82E-06 | 0 |
E/K | rs397517682 | 0.673 | 0.979 | N | 0.536 | 0.313 | None | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 1.93723E-04 | None | 0 | 0 | 0 | 0 | 0 |
E/K | rs397517682 | 0.673 | 0.979 | N | 0.536 | 0.313 | None | gnomAD-4.0.0 | 4.95879E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.23204E-05 | None | 0 | 0 | 1.6955E-06 | 4.3929E-05 | 1.60149E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.4967 | ambiguous | 0.4513 | ambiguous | -0.355 | Destabilizing | 0.892 | D | 0.5 | neutral | N | 0.450534161 | None | None | I |
E/C | 0.979 | likely_pathogenic | 0.9744 | pathogenic | -0.128 | Destabilizing | 0.999 | D | 0.659 | neutral | None | None | None | None | I |
E/D | 0.1936 | likely_benign | 0.1508 | benign | -0.316 | Destabilizing | 0.025 | N | 0.363 | neutral | N | 0.409303614 | None | None | I |
E/F | 0.9715 | likely_pathogenic | 0.9658 | pathogenic | -0.136 | Destabilizing | 0.999 | D | 0.625 | neutral | None | None | None | None | I |
E/G | 0.5428 | ambiguous | 0.5015 | ambiguous | -0.571 | Destabilizing | 0.805 | D | 0.507 | neutral | N | 0.493575649 | None | None | I |
E/H | 0.8855 | likely_pathogenic | 0.8566 | pathogenic | 0.096 | Stabilizing | 0.987 | D | 0.486 | neutral | None | None | None | None | I |
E/I | 0.8877 | likely_pathogenic | 0.8554 | pathogenic | 0.185 | Stabilizing | 0.987 | D | 0.641 | neutral | None | None | None | None | I |
E/K | 0.7337 | likely_pathogenic | 0.6715 | pathogenic | 0.233 | Stabilizing | 0.979 | D | 0.536 | neutral | N | 0.449342083 | None | None | I |
E/L | 0.8786 | likely_pathogenic | 0.8445 | pathogenic | 0.185 | Stabilizing | 0.987 | D | 0.624 | neutral | None | None | None | None | I |
E/M | 0.8943 | likely_pathogenic | 0.8747 | pathogenic | 0.215 | Stabilizing | 0.999 | D | 0.567 | neutral | None | None | None | None | I |
E/N | 0.5879 | likely_pathogenic | 0.5278 | ambiguous | -0.125 | Destabilizing | 0.073 | N | 0.369 | neutral | None | None | None | None | I |
E/P | 0.9152 | likely_pathogenic | 0.8946 | pathogenic | 0.026 | Stabilizing | 0.996 | D | 0.495 | neutral | None | None | None | None | I |
E/Q | 0.518 | ambiguous | 0.4687 | ambiguous | -0.06 | Destabilizing | 0.987 | D | 0.459 | neutral | N | 0.485417526 | None | None | I |
E/R | 0.8195 | likely_pathogenic | 0.7789 | pathogenic | 0.481 | Stabilizing | 0.975 | D | 0.481 | neutral | None | None | None | None | I |
E/S | 0.4762 | ambiguous | 0.4322 | ambiguous | -0.293 | Destabilizing | 0.845 | D | 0.52 | neutral | None | None | None | None | I |
E/T | 0.6623 | likely_pathogenic | 0.5989 | pathogenic | -0.114 | Destabilizing | 0.916 | D | 0.457 | neutral | None | None | None | None | I |
E/V | 0.7251 | likely_pathogenic | 0.6675 | pathogenic | 0.026 | Stabilizing | 0.983 | D | 0.565 | neutral | D | 0.52355184 | None | None | I |
E/W | 0.9913 | likely_pathogenic | 0.9891 | pathogenic | 0.027 | Stabilizing | 0.999 | D | 0.659 | neutral | None | None | None | None | I |
E/Y | 0.9388 | likely_pathogenic | 0.9198 | pathogenic | 0.104 | Stabilizing | 0.996 | D | 0.566 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.