Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23366 | 70321;70322;70323 | chr2:178576036;178576035;178576034 | chr2:179440763;179440762;179440761 |
N2AB | 21725 | 65398;65399;65400 | chr2:178576036;178576035;178576034 | chr2:179440763;179440762;179440761 |
N2A | 20798 | 62617;62618;62619 | chr2:178576036;178576035;178576034 | chr2:179440763;179440762;179440761 |
N2B | 14301 | 43126;43127;43128 | chr2:178576036;178576035;178576034 | chr2:179440763;179440762;179440761 |
Novex-1 | 14426 | 43501;43502;43503 | chr2:178576036;178576035;178576034 | chr2:179440763;179440762;179440761 |
Novex-2 | 14493 | 43702;43703;43704 | chr2:178576036;178576035;178576034 | chr2:179440763;179440762;179440761 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | rs372782502 | -1.931 | 0.994 | N | 0.683 | 0.369 | 0.497679007273 | gnomAD-2.1.1 | 3.01745E-04 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 2.4521E-03 | None | 0 | 0 | 0 |
V/A | rs372782502 | -1.931 | 0.994 | N | 0.683 | 0.369 | 0.497679007273 | gnomAD-3.1.2 | 5.26E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 1.65906E-03 | 0 |
V/A | rs372782502 | -1.931 | 0.994 | N | 0.683 | 0.369 | 0.497679007273 | 1000 genomes | 9.98403E-04 | None | None | None | None | N | None | 0 | 0 | None | None | 0 | 0 | None | None | None | 5.1E-03 | None |
V/A | rs372782502 | -1.931 | 0.994 | N | 0.683 | 0.369 | 0.497679007273 | gnomAD-4.0.0 | 1.12193E-04 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.86715E-03 | 1.7609E-04 |
V/E | rs372782502 | -2.582 | 0.999 | N | 0.841 | 0.682 | 0.785853343848 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | N | None | 0 | 1.17924E-03 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
V/E | rs372782502 | -2.582 | 0.999 | N | 0.841 | 0.682 | 0.785853343848 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 6.55E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
V/E | rs372782502 | -2.582 | 0.999 | N | 0.841 | 0.682 | 0.785853343848 | gnomAD-4.0.0 | 1.23979E-06 | None | None | None | None | N | None | 0 | 3.33511E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
V/M | rs1238454141 | -0.195 | 0.998 | N | 0.72 | 0.306 | 0.388334884743 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.89E-06 | 0 |
V/M | rs1238454141 | -0.195 | 0.998 | N | 0.72 | 0.306 | 0.388334884743 | gnomAD-4.0.0 | 4.77649E-06 | None | None | None | None | N | None | 0 | 0 | None | 4.76917E-05 | 0 | None | 0 | 0 | 2.86007E-06 | 0 | 3.0248E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.848 | likely_pathogenic | 0.8432 | pathogenic | -1.873 | Destabilizing | 0.994 | D | 0.683 | prob.neutral | N | 0.466694826 | None | None | N |
V/C | 0.9113 | likely_pathogenic | 0.9194 | pathogenic | -1.254 | Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | N |
V/D | 0.9982 | likely_pathogenic | 0.9984 | pathogenic | -2.601 | Highly Destabilizing | 1.0 | D | 0.85 | deleterious | None | None | None | None | N |
V/E | 0.9945 | likely_pathogenic | 0.9943 | pathogenic | -2.365 | Highly Destabilizing | 0.999 | D | 0.841 | deleterious | N | 0.486891102 | None | None | N |
V/F | 0.8193 | likely_pathogenic | 0.831 | pathogenic | -1.137 | Destabilizing | 0.999 | D | 0.785 | deleterious | None | None | None | None | N |
V/G | 0.9455 | likely_pathogenic | 0.9518 | pathogenic | -2.393 | Highly Destabilizing | 0.999 | D | 0.856 | deleterious | N | 0.507197442 | None | None | N |
V/H | 0.9956 | likely_pathogenic | 0.9959 | pathogenic | -2.046 | Highly Destabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | N |
V/I | 0.1143 | likely_benign | 0.1155 | benign | -0.415 | Destabilizing | 0.611 | D | 0.335 | neutral | None | None | None | None | N |
V/K | 0.9947 | likely_pathogenic | 0.9946 | pathogenic | -1.672 | Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | N |
V/L | 0.6565 | likely_pathogenic | 0.6573 | pathogenic | -0.415 | Destabilizing | 0.948 | D | 0.65 | neutral | N | 0.512525903 | None | None | N |
V/M | 0.7459 | likely_pathogenic | 0.7447 | pathogenic | -0.365 | Destabilizing | 0.998 | D | 0.72 | prob.delet. | N | 0.475281307 | None | None | N |
V/N | 0.9907 | likely_pathogenic | 0.9918 | pathogenic | -2.093 | Highly Destabilizing | 1.0 | D | 0.86 | deleterious | None | None | None | None | N |
V/P | 0.9944 | likely_pathogenic | 0.9953 | pathogenic | -0.876 | Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | N |
V/Q | 0.9872 | likely_pathogenic | 0.9873 | pathogenic | -1.921 | Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | N |
V/R | 0.9876 | likely_pathogenic | 0.988 | pathogenic | -1.526 | Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | N |
V/S | 0.9331 | likely_pathogenic | 0.938 | pathogenic | -2.646 | Highly Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | N |
V/T | 0.8829 | likely_pathogenic | 0.8776 | pathogenic | -2.263 | Highly Destabilizing | 0.996 | D | 0.738 | prob.delet. | None | None | None | None | N |
V/W | 0.9967 | likely_pathogenic | 0.9973 | pathogenic | -1.644 | Destabilizing | 1.0 | D | 0.842 | deleterious | None | None | None | None | N |
V/Y | 0.9844 | likely_pathogenic | 0.9856 | pathogenic | -1.204 | Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.