Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2337 | 7234;7235;7236 | chr2:178774255;178774254;178774253 | chr2:179638982;179638981;179638980 |
N2AB | 2337 | 7234;7235;7236 | chr2:178774255;178774254;178774253 | chr2:179638982;179638981;179638980 |
N2A | 2337 | 7234;7235;7236 | chr2:178774255;178774254;178774253 | chr2:179638982;179638981;179638980 |
N2B | 2291 | 7096;7097;7098 | chr2:178774255;178774254;178774253 | chr2:179638982;179638981;179638980 |
Novex-1 | 2291 | 7096;7097;7098 | chr2:178774255;178774254;178774253 | chr2:179638982;179638981;179638980 |
Novex-2 | 2291 | 7096;7097;7098 | chr2:178774255;178774254;178774253 | chr2:179638982;179638981;179638980 |
Novex-3 | 2337 | 7234;7235;7236 | chr2:178774255;178774254;178774253 | chr2:179638982;179638981;179638980 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/G | None | None | 0.815 | N | 0.615 | 0.205 | 0.198526703765 | gnomAD-4.0.0 | 1.59057E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43271E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0938 | likely_benign | 0.0958 | benign | -0.878 | Destabilizing | 0.206 | N | 0.423 | neutral | None | None | None | None | N |
S/C | 0.1001 | likely_benign | 0.1015 | benign | -0.24 | Destabilizing | 0.015 | N | 0.529 | neutral | N | 0.468642816 | None | None | N |
S/D | 0.7123 | likely_pathogenic | 0.7012 | pathogenic | -1.66 | Destabilizing | 0.854 | D | 0.643 | neutral | None | None | None | None | N |
S/E | 0.6893 | likely_pathogenic | 0.6815 | pathogenic | -1.359 | Destabilizing | 0.854 | D | 0.647 | neutral | None | None | None | None | N |
S/F | 0.2743 | likely_benign | 0.2966 | benign | -0.574 | Destabilizing | 0.91 | D | 0.745 | deleterious | None | None | None | None | N |
S/G | 0.1373 | likely_benign | 0.1418 | benign | -1.306 | Destabilizing | 0.815 | D | 0.615 | neutral | N | 0.506647237 | None | None | N |
S/H | 0.3795 | ambiguous | 0.382 | ambiguous | -1.347 | Destabilizing | 0.996 | D | 0.714 | prob.delet. | None | None | None | None | N |
S/I | 0.209 | likely_benign | 0.2227 | benign | 0.271 | Stabilizing | 0.028 | N | 0.613 | neutral | N | 0.448065193 | None | None | N |
S/K | 0.7461 | likely_pathogenic | 0.7278 | pathogenic | 0.445 | Stabilizing | 0.742 | D | 0.649 | neutral | None | None | None | None | N |
S/L | 0.1636 | likely_benign | 0.1742 | benign | 0.271 | Stabilizing | 0.373 | N | 0.681 | prob.neutral | None | None | None | None | N |
S/M | 0.2597 | likely_benign | 0.2847 | benign | -0.181 | Destabilizing | 0.953 | D | 0.729 | prob.delet. | None | None | None | None | N |
S/N | 0.2598 | likely_benign | 0.254 | benign | -0.549 | Destabilizing | 0.815 | D | 0.641 | neutral | N | 0.467790772 | None | None | N |
S/P | 0.983 | likely_pathogenic | 0.9817 | pathogenic | -0.084 | Destabilizing | 0.984 | D | 0.765 | deleterious | None | None | None | None | N |
S/Q | 0.5658 | likely_pathogenic | 0.5659 | pathogenic | -0.073 | Destabilizing | 0.984 | D | 0.68 | prob.neutral | None | None | None | None | N |
S/R | 0.5915 | likely_pathogenic | 0.5713 | pathogenic | -0.26 | Destabilizing | 0.939 | D | 0.76 | deleterious | N | 0.445800494 | None | None | N |
S/T | 0.0749 | likely_benign | 0.077 | benign | -0.112 | Destabilizing | 0.004 | N | 0.213 | neutral | N | 0.384117835 | None | None | N |
S/V | 0.2082 | likely_benign | 0.2227 | benign | -0.084 | Destabilizing | 0.373 | N | 0.685 | prob.neutral | None | None | None | None | N |
S/W | 0.4747 | ambiguous | 0.4991 | ambiguous | -0.93 | Destabilizing | 0.996 | D | 0.761 | deleterious | None | None | None | None | N |
S/Y | 0.2374 | likely_benign | 0.2501 | benign | -0.437 | Destabilizing | 0.984 | D | 0.737 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.