Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23381 | 70366;70367;70368 | chr2:178575991;178575990;178575989 | chr2:179440718;179440717;179440716 |
N2AB | 21740 | 65443;65444;65445 | chr2:178575991;178575990;178575989 | chr2:179440718;179440717;179440716 |
N2A | 20813 | 62662;62663;62664 | chr2:178575991;178575990;178575989 | chr2:179440718;179440717;179440716 |
N2B | 14316 | 43171;43172;43173 | chr2:178575991;178575990;178575989 | chr2:179440718;179440717;179440716 |
Novex-1 | 14441 | 43546;43547;43548 | chr2:178575991;178575990;178575989 | chr2:179440718;179440717;179440716 |
Novex-2 | 14508 | 43747;43748;43749 | chr2:178575991;178575990;178575989 | chr2:179440718;179440717;179440716 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/N | rs1559456668 | None | 0.801 | N | 0.389 | 0.269 | 0.236278675362 | gnomAD-4.0.0 | 3.19209E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.7405E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.264 | likely_benign | 0.3198 | benign | -0.196 | Destabilizing | 0.051 | N | 0.264 | neutral | N | 0.501466335 | None | None | I |
D/C | 0.7592 | likely_pathogenic | 0.8011 | pathogenic | 0.096 | Stabilizing | 0.998 | D | 0.485 | neutral | None | None | None | None | I |
D/E | 0.1439 | likely_benign | 0.1521 | benign | -0.221 | Destabilizing | 0.051 | N | 0.209 | neutral | N | 0.45015208 | None | None | I |
D/F | 0.7994 | likely_pathogenic | 0.8534 | pathogenic | -0.206 | Destabilizing | 0.991 | D | 0.483 | neutral | None | None | None | None | I |
D/G | 0.1698 | likely_benign | 0.1956 | benign | -0.364 | Destabilizing | 0.005 | N | 0.183 | neutral | N | 0.47300751 | None | None | I |
D/H | 0.5301 | ambiguous | 0.5959 | pathogenic | 0.006 | Stabilizing | 0.997 | D | 0.367 | neutral | N | 0.491832307 | None | None | I |
D/I | 0.6424 | likely_pathogenic | 0.7176 | pathogenic | 0.191 | Stabilizing | 0.974 | D | 0.493 | neutral | None | None | None | None | I |
D/K | 0.5583 | ambiguous | 0.6194 | pathogenic | 0.457 | Stabilizing | 0.842 | D | 0.4 | neutral | None | None | None | None | I |
D/L | 0.5925 | likely_pathogenic | 0.6554 | pathogenic | 0.191 | Stabilizing | 0.949 | D | 0.479 | neutral | None | None | None | None | I |
D/M | 0.7452 | likely_pathogenic | 0.7859 | pathogenic | 0.276 | Stabilizing | 0.998 | D | 0.475 | neutral | None | None | None | None | I |
D/N | 0.1533 | likely_benign | 0.1647 | benign | 0.169 | Stabilizing | 0.801 | D | 0.389 | neutral | N | 0.472388648 | None | None | I |
D/P | 0.7566 | likely_pathogenic | 0.8299 | pathogenic | 0.083 | Stabilizing | 0.974 | D | 0.372 | neutral | None | None | None | None | I |
D/Q | 0.4478 | ambiguous | 0.4943 | ambiguous | 0.197 | Stabilizing | 0.949 | D | 0.333 | neutral | None | None | None | None | I |
D/R | 0.6098 | likely_pathogenic | 0.6775 | pathogenic | 0.565 | Stabilizing | 0.949 | D | 0.467 | neutral | None | None | None | None | I |
D/S | 0.2257 | likely_benign | 0.2651 | benign | 0.085 | Stabilizing | 0.525 | D | 0.317 | neutral | None | None | None | None | I |
D/T | 0.4302 | ambiguous | 0.5073 | ambiguous | 0.219 | Stabilizing | 0.842 | D | 0.409 | neutral | None | None | None | None | I |
D/V | 0.4105 | ambiguous | 0.4941 | ambiguous | 0.083 | Stabilizing | 0.801 | D | 0.486 | neutral | N | 0.507912305 | None | None | I |
D/W | 0.9341 | likely_pathogenic | 0.9533 | pathogenic | -0.105 | Destabilizing | 0.998 | D | 0.54 | neutral | None | None | None | None | I |
D/Y | 0.4393 | ambiguous | 0.5188 | ambiguous | 0.026 | Stabilizing | 0.989 | D | 0.475 | neutral | N | 0.492085797 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.