Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23382 | 70369;70370;70371 | chr2:178575988;178575987;178575986 | chr2:179440715;179440714;179440713 |
N2AB | 21741 | 65446;65447;65448 | chr2:178575988;178575987;178575986 | chr2:179440715;179440714;179440713 |
N2A | 20814 | 62665;62666;62667 | chr2:178575988;178575987;178575986 | chr2:179440715;179440714;179440713 |
N2B | 14317 | 43174;43175;43176 | chr2:178575988;178575987;178575986 | chr2:179440715;179440714;179440713 |
Novex-1 | 14442 | 43549;43550;43551 | chr2:178575988;178575987;178575986 | chr2:179440715;179440714;179440713 |
Novex-2 | 14509 | 43750;43751;43752 | chr2:178575988;178575987;178575986 | chr2:179440715;179440714;179440713 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/D | None | None | None | N | 0.12 | 0.102 | 0.0401082797425 | gnomAD-4.0.0 | 1.59643E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.87145E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.1501 | likely_benign | 0.1657 | benign | -0.094 | Destabilizing | 0.016 | N | 0.273 | neutral | None | None | None | None | I |
N/C | 0.2458 | likely_benign | 0.288 | benign | 0.217 | Stabilizing | 0.864 | D | 0.331 | neutral | None | None | None | None | I |
N/D | 0.0668 | likely_benign | 0.0675 | benign | 0.1 | Stabilizing | None | N | 0.12 | neutral | N | 0.405702296 | None | None | I |
N/E | 0.1789 | likely_benign | 0.1905 | benign | 0.034 | Stabilizing | 0.016 | N | 0.245 | neutral | None | None | None | None | I |
N/F | 0.4979 | ambiguous | 0.5556 | ambiguous | -0.704 | Destabilizing | 0.628 | D | 0.347 | neutral | None | None | None | None | I |
N/G | 0.1271 | likely_benign | 0.1397 | benign | -0.182 | Destabilizing | None | N | 0.155 | neutral | None | None | None | None | I |
N/H | 0.1153 | likely_benign | 0.1268 | benign | -0.23 | Destabilizing | 0.295 | N | 0.309 | neutral | N | 0.512005829 | None | None | I |
N/I | 0.2494 | likely_benign | 0.2945 | benign | 0.039 | Stabilizing | 0.295 | N | 0.395 | neutral | N | 0.462404065 | None | None | I |
N/K | 0.2255 | likely_benign | 0.2557 | benign | 0.153 | Stabilizing | 0.055 | N | 0.215 | neutral | N | 0.486107306 | None | None | I |
N/L | 0.2677 | likely_benign | 0.2974 | benign | 0.039 | Stabilizing | 0.072 | N | 0.437 | neutral | None | None | None | None | I |
N/M | 0.3281 | likely_benign | 0.3504 | ambiguous | 0.165 | Stabilizing | 0.864 | D | 0.328 | neutral | None | None | None | None | I |
N/P | 0.5461 | ambiguous | 0.5974 | pathogenic | 0.017 | Stabilizing | 0.136 | N | 0.406 | neutral | None | None | None | None | I |
N/Q | 0.2149 | likely_benign | 0.2369 | benign | -0.216 | Destabilizing | 0.072 | N | 0.295 | neutral | None | None | None | None | I |
N/R | 0.2808 | likely_benign | 0.3213 | benign | 0.212 | Stabilizing | 0.072 | N | 0.301 | neutral | None | None | None | None | I |
N/S | 0.0748 | likely_benign | 0.076 | benign | 0.014 | Stabilizing | 0.012 | N | 0.281 | neutral | N | 0.491859843 | None | None | I |
N/T | 0.1117 | likely_benign | 0.1158 | benign | 0.06 | Stabilizing | 0.055 | N | 0.213 | neutral | N | 0.5053865 | None | None | I |
N/V | 0.2236 | likely_benign | 0.2562 | benign | 0.017 | Stabilizing | 0.136 | N | 0.43 | neutral | None | None | None | None | I |
N/W | 0.748 | likely_pathogenic | 0.8023 | pathogenic | -0.837 | Destabilizing | 0.864 | D | 0.373 | neutral | None | None | None | None | I |
N/Y | 0.1899 | likely_benign | 0.2236 | benign | -0.509 | Destabilizing | 0.56 | D | 0.337 | neutral | N | 0.473506881 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.