Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23390 | 70393;70394;70395 | chr2:178575964;178575963;178575962 | chr2:179440691;179440690;179440689 |
N2AB | 21749 | 65470;65471;65472 | chr2:178575964;178575963;178575962 | chr2:179440691;179440690;179440689 |
N2A | 20822 | 62689;62690;62691 | chr2:178575964;178575963;178575962 | chr2:179440691;179440690;179440689 |
N2B | 14325 | 43198;43199;43200 | chr2:178575964;178575963;178575962 | chr2:179440691;179440690;179440689 |
Novex-1 | 14450 | 43573;43574;43575 | chr2:178575964;178575963;178575962 | chr2:179440691;179440690;179440689 |
Novex-2 | 14517 | 43774;43775;43776 | chr2:178575964;178575963;178575962 | chr2:179440691;179440690;179440689 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/H | None | None | None | N | 0.144 | 0.12 | 0.233150807113 | gnomAD-4.0.0 | 1.59651E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.87219E-06 | 0 | 0 |
N/S | rs747202126 | 0.142 | 0.005 | N | 0.164 | 0.13 | 0.163833314356 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
N/S | rs747202126 | 0.142 | 0.005 | N | 0.164 | 0.13 | 0.163833314356 | gnomAD-4.0.0 | 2.05553E-06 | None | None | None | None | N | None | 2.99204E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 9.00844E-07 | 1.16025E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.1444 | likely_benign | 0.1629 | benign | -0.473 | Destabilizing | 0.209 | N | 0.342 | neutral | None | None | None | None | N |
N/C | 0.199 | likely_benign | 0.2161 | benign | 0.137 | Stabilizing | 0.991 | D | 0.352 | neutral | None | None | None | None | N |
N/D | 0.1443 | likely_benign | 0.1644 | benign | 0.182 | Stabilizing | 0.285 | N | 0.245 | neutral | N | 0.438802589 | None | None | N |
N/E | 0.3285 | likely_benign | 0.3852 | ambiguous | 0.221 | Stabilizing | 0.345 | N | 0.229 | neutral | None | None | None | None | N |
N/F | 0.3635 | ambiguous | 0.4036 | ambiguous | -0.504 | Destabilizing | 0.901 | D | 0.371 | neutral | None | None | None | None | N |
N/G | 0.2555 | likely_benign | 0.2759 | benign | -0.738 | Destabilizing | 0.209 | N | 0.255 | neutral | None | None | None | None | N |
N/H | 0.0925 | likely_benign | 0.0953 | benign | -0.527 | Destabilizing | None | N | 0.144 | neutral | N | 0.409423831 | None | None | N |
N/I | 0.1229 | likely_benign | 0.1352 | benign | 0.16 | Stabilizing | 0.873 | D | 0.379 | neutral | N | 0.430337821 | None | None | N |
N/K | 0.2994 | likely_benign | 0.3352 | benign | 0.026 | Stabilizing | 0.285 | N | 0.213 | neutral | N | 0.411767916 | None | None | N |
N/L | 0.1738 | likely_benign | 0.1808 | benign | 0.16 | Stabilizing | 0.561 | D | 0.383 | neutral | None | None | None | None | N |
N/M | 0.2169 | likely_benign | 0.2358 | benign | 0.317 | Stabilizing | 0.965 | D | 0.345 | neutral | None | None | None | None | N |
N/P | 0.8213 | likely_pathogenic | 0.8481 | pathogenic | -0.021 | Destabilizing | 0.722 | D | 0.377 | neutral | None | None | None | None | N |
N/Q | 0.2622 | likely_benign | 0.2822 | benign | -0.481 | Destabilizing | 0.561 | D | 0.263 | neutral | None | None | None | None | N |
N/R | 0.3085 | likely_benign | 0.3523 | ambiguous | 0.021 | Stabilizing | 0.561 | D | 0.19 | neutral | None | None | None | None | N |
N/S | 0.0724 | likely_benign | 0.0746 | benign | -0.454 | Destabilizing | 0.005 | N | 0.164 | neutral | N | 0.423851779 | None | None | N |
N/T | 0.0815 | likely_benign | 0.0896 | benign | -0.237 | Destabilizing | 0.166 | N | 0.213 | neutral | N | 0.42947103 | None | None | N |
N/V | 0.118 | likely_benign | 0.1281 | benign | -0.021 | Destabilizing | 0.561 | D | 0.393 | neutral | None | None | None | None | N |
N/W | 0.679 | likely_pathogenic | 0.7226 | pathogenic | -0.373 | Destabilizing | 0.991 | D | 0.38 | neutral | None | None | None | None | N |
N/Y | 0.1387 | likely_benign | 0.1524 | benign | -0.128 | Destabilizing | 0.491 | N | 0.373 | neutral | N | 0.482940155 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.