Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23402 | 70429;70430;70431 | chr2:178575928;178575927;178575926 | chr2:179440655;179440654;179440653 |
N2AB | 21761 | 65506;65507;65508 | chr2:178575928;178575927;178575926 | chr2:179440655;179440654;179440653 |
N2A | 20834 | 62725;62726;62727 | chr2:178575928;178575927;178575926 | chr2:179440655;179440654;179440653 |
N2B | 14337 | 43234;43235;43236 | chr2:178575928;178575927;178575926 | chr2:179440655;179440654;179440653 |
Novex-1 | 14462 | 43609;43610;43611 | chr2:178575928;178575927;178575926 | chr2:179440655;179440654;179440653 |
Novex-2 | 14529 | 43810;43811;43812 | chr2:178575928;178575927;178575926 | chr2:179440655;179440654;179440653 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | None | None | 0.014 | D | 0.554 | 0.708 | 0.790246465493 | gnomAD-4.0.0 | 2.73739E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.59868E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9608 | likely_pathogenic | 0.9721 | pathogenic | -2.58 | Highly Destabilizing | 0.559 | D | 0.716 | prob.delet. | None | None | None | None | N |
I/C | 0.9508 | likely_pathogenic | 0.9626 | pathogenic | -1.991 | Destabilizing | 0.998 | D | 0.787 | deleterious | None | None | None | None | N |
I/D | 0.996 | likely_pathogenic | 0.9968 | pathogenic | -2.872 | Highly Destabilizing | 0.956 | D | 0.872 | deleterious | None | None | None | None | N |
I/E | 0.9899 | likely_pathogenic | 0.9917 | pathogenic | -2.727 | Highly Destabilizing | 0.956 | D | 0.865 | deleterious | None | None | None | None | N |
I/F | 0.5453 | ambiguous | 0.6007 | pathogenic | -1.686 | Destabilizing | 0.97 | D | 0.729 | prob.delet. | D | 0.582704258 | None | None | N |
I/G | 0.9944 | likely_pathogenic | 0.9961 | pathogenic | -3.063 | Highly Destabilizing | 0.956 | D | 0.851 | deleterious | None | None | None | None | N |
I/H | 0.9756 | likely_pathogenic | 0.9806 | pathogenic | -2.418 | Highly Destabilizing | 0.998 | D | 0.866 | deleterious | None | None | None | None | N |
I/K | 0.9796 | likely_pathogenic | 0.9833 | pathogenic | -2.112 | Highly Destabilizing | 0.956 | D | 0.863 | deleterious | None | None | None | None | N |
I/L | 0.202 | likely_benign | 0.2306 | benign | -1.219 | Destabilizing | 0.294 | N | 0.519 | neutral | D | 0.534405087 | None | None | N |
I/M | 0.3075 | likely_benign | 0.369 | ambiguous | -1.093 | Destabilizing | 0.97 | D | 0.689 | prob.neutral | D | 0.575567875 | None | None | N |
I/N | 0.9404 | likely_pathogenic | 0.9544 | pathogenic | -2.278 | Highly Destabilizing | 0.942 | D | 0.873 | deleterious | D | 0.583713279 | None | None | N |
I/P | 0.9954 | likely_pathogenic | 0.9957 | pathogenic | -1.65 | Destabilizing | 0.978 | D | 0.872 | deleterious | None | None | None | None | N |
I/Q | 0.9742 | likely_pathogenic | 0.9793 | pathogenic | -2.284 | Highly Destabilizing | 0.978 | D | 0.867 | deleterious | None | None | None | None | N |
I/R | 0.9704 | likely_pathogenic | 0.9753 | pathogenic | -1.597 | Destabilizing | 0.956 | D | 0.871 | deleterious | None | None | None | None | N |
I/S | 0.9424 | likely_pathogenic | 0.957 | pathogenic | -2.946 | Highly Destabilizing | 0.698 | D | 0.834 | deleterious | D | 0.609251391 | None | None | N |
I/T | 0.9358 | likely_pathogenic | 0.9536 | pathogenic | -2.668 | Highly Destabilizing | 0.014 | N | 0.554 | neutral | D | 0.608847783 | None | None | N |
I/V | 0.1593 | likely_benign | 0.1918 | benign | -1.65 | Destabilizing | 0.006 | N | 0.281 | neutral | D | 0.540198891 | None | None | N |
I/W | 0.9815 | likely_pathogenic | 0.9847 | pathogenic | -2.007 | Highly Destabilizing | 0.998 | D | 0.861 | deleterious | None | None | None | None | N |
I/Y | 0.9251 | likely_pathogenic | 0.9378 | pathogenic | -1.76 | Destabilizing | 0.993 | D | 0.787 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.