Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23403 | 70432;70433;70434 | chr2:178575925;178575924;178575923 | chr2:179440652;179440651;179440650 |
N2AB | 21762 | 65509;65510;65511 | chr2:178575925;178575924;178575923 | chr2:179440652;179440651;179440650 |
N2A | 20835 | 62728;62729;62730 | chr2:178575925;178575924;178575923 | chr2:179440652;179440651;179440650 |
N2B | 14338 | 43237;43238;43239 | chr2:178575925;178575924;178575923 | chr2:179440652;179440651;179440650 |
Novex-1 | 14463 | 43612;43613;43614 | chr2:178575925;178575924;178575923 | chr2:179440652;179440651;179440650 |
Novex-2 | 14530 | 43813;43814;43815 | chr2:178575925;178575924;178575923 | chr2:179440652;179440651;179440650 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/S | rs1399743496 | -0.687 | 0.955 | N | 0.529 | 0.286 | 0.313818047136 | gnomAD-4.0.0 | 1.59203E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86025E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.1681 | likely_benign | 0.2053 | benign | -1.21 | Destabilizing | 0.955 | D | 0.471 | neutral | N | 0.483860088 | None | None | I |
P/C | 0.7884 | likely_pathogenic | 0.8595 | pathogenic | -0.944 | Destabilizing | 1.0 | D | 0.641 | neutral | None | None | None | None | I |
P/D | 0.5654 | likely_pathogenic | 0.6497 | pathogenic | -0.943 | Destabilizing | 0.995 | D | 0.557 | neutral | None | None | None | None | I |
P/E | 0.4037 | ambiguous | 0.4838 | ambiguous | -1.006 | Destabilizing | 0.995 | D | 0.552 | neutral | None | None | None | None | I |
P/F | 0.8506 | likely_pathogenic | 0.9184 | pathogenic | -1.14 | Destabilizing | 0.999 | D | 0.653 | neutral | None | None | None | None | I |
P/G | 0.3694 | ambiguous | 0.4445 | ambiguous | -1.45 | Destabilizing | 0.995 | D | 0.547 | neutral | None | None | None | None | I |
P/H | 0.3628 | ambiguous | 0.4616 | ambiguous | -0.908 | Destabilizing | 1.0 | D | 0.585 | neutral | None | None | None | None | I |
P/I | 0.7649 | likely_pathogenic | 0.8476 | pathogenic | -0.685 | Destabilizing | 0.995 | D | 0.67 | neutral | None | None | None | None | I |
P/K | 0.5148 | ambiguous | 0.617 | pathogenic | -0.929 | Destabilizing | 0.995 | D | 0.557 | neutral | None | None | None | None | I |
P/L | 0.3204 | likely_benign | 0.4085 | ambiguous | -0.685 | Destabilizing | 0.987 | D | 0.616 | neutral | N | 0.474683244 | None | None | I |
P/M | 0.5891 | likely_pathogenic | 0.6842 | pathogenic | -0.516 | Destabilizing | 1.0 | D | 0.583 | neutral | None | None | None | None | I |
P/N | 0.3849 | ambiguous | 0.4557 | ambiguous | -0.67 | Destabilizing | 0.995 | D | 0.603 | neutral | None | None | None | None | I |
P/Q | 0.2852 | likely_benign | 0.3495 | ambiguous | -0.937 | Destabilizing | 0.997 | D | 0.585 | neutral | N | 0.5105639 | None | None | I |
P/R | 0.3915 | ambiguous | 0.4962 | ambiguous | -0.339 | Destabilizing | 0.993 | D | 0.611 | neutral | N | 0.454595974 | None | None | I |
P/S | 0.187 | likely_benign | 0.2212 | benign | -1.163 | Destabilizing | 0.955 | D | 0.529 | neutral | N | 0.470256072 | None | None | I |
P/T | 0.1901 | likely_benign | 0.2231 | benign | -1.122 | Destabilizing | 0.362 | N | 0.342 | neutral | N | 0.475683322 | None | None | I |
P/V | 0.5734 | likely_pathogenic | 0.68 | pathogenic | -0.824 | Destabilizing | 0.99 | D | 0.557 | neutral | None | None | None | None | I |
P/W | 0.8753 | likely_pathogenic | 0.9312 | pathogenic | -1.212 | Destabilizing | 1.0 | D | 0.64 | neutral | None | None | None | None | I |
P/Y | 0.7564 | likely_pathogenic | 0.8513 | pathogenic | -0.933 | Destabilizing | 1.0 | D | 0.651 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.