Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23410 | 70453;70454;70455 | chr2:178575904;178575903;178575902 | chr2:179440631;179440630;179440629 |
N2AB | 21769 | 65530;65531;65532 | chr2:178575904;178575903;178575902 | chr2:179440631;179440630;179440629 |
N2A | 20842 | 62749;62750;62751 | chr2:178575904;178575903;178575902 | chr2:179440631;179440630;179440629 |
N2B | 14345 | 43258;43259;43260 | chr2:178575904;178575903;178575902 | chr2:179440631;179440630;179440629 |
Novex-1 | 14470 | 43633;43634;43635 | chr2:178575904;178575903;178575902 | chr2:179440631;179440630;179440629 |
Novex-2 | 14537 | 43834;43835;43836 | chr2:178575904;178575903;178575902 | chr2:179440631;179440630;179440629 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/N | rs1473979874 | -0.468 | 0.491 | N | 0.437 | 0.334 | 0.337868961071 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.88E-06 | 0 |
T/N | rs1473979874 | -0.468 | 0.491 | N | 0.437 | 0.334 | 0.337868961071 | gnomAD-4.0.0 | 1.36855E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79914E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.06 | likely_benign | 0.0803 | benign | -0.876 | Destabilizing | None | N | 0.149 | neutral | N | 0.378828778 | None | None | I |
T/C | 0.3904 | ambiguous | 0.4745 | ambiguous | -0.499 | Destabilizing | 0.901 | D | 0.521 | neutral | None | None | None | None | I |
T/D | 0.7739 | likely_pathogenic | 0.832 | pathogenic | 0.234 | Stabilizing | 0.561 | D | 0.501 | neutral | None | None | None | None | I |
T/E | 0.6877 | likely_pathogenic | 0.741 | pathogenic | 0.231 | Stabilizing | 0.561 | D | 0.521 | neutral | None | None | None | None | I |
T/F | 0.5684 | likely_pathogenic | 0.7215 | pathogenic | -1.038 | Destabilizing | 0.818 | D | 0.561 | neutral | None | None | None | None | I |
T/G | 0.1869 | likely_benign | 0.2358 | benign | -1.113 | Destabilizing | 0.209 | N | 0.387 | neutral | None | None | None | None | I |
T/H | 0.4995 | ambiguous | 0.5782 | pathogenic | -1.364 | Destabilizing | 0.965 | D | 0.519 | neutral | None | None | None | None | I |
T/I | 0.5759 | likely_pathogenic | 0.6875 | pathogenic | -0.338 | Destabilizing | 0.003 | N | 0.248 | neutral | D | 0.53227011 | None | None | I |
T/K | 0.5647 | likely_pathogenic | 0.6517 | pathogenic | -0.512 | Destabilizing | 0.561 | D | 0.52 | neutral | None | None | None | None | I |
T/L | 0.242 | likely_benign | 0.3371 | benign | -0.338 | Destabilizing | 0.083 | N | 0.341 | neutral | None | None | None | None | I |
T/M | 0.1341 | likely_benign | 0.1715 | benign | -0.054 | Destabilizing | 0.818 | D | 0.536 | neutral | None | None | None | None | I |
T/N | 0.2426 | likely_benign | 0.2973 | benign | -0.445 | Destabilizing | 0.491 | N | 0.437 | neutral | N | 0.494135797 | None | None | I |
T/P | 0.6856 | likely_pathogenic | 0.7785 | pathogenic | -0.486 | Destabilizing | 0.662 | D | 0.524 | neutral | D | 0.53227011 | None | None | I |
T/Q | 0.4419 | ambiguous | 0.5033 | ambiguous | -0.606 | Destabilizing | 0.901 | D | 0.561 | neutral | None | None | None | None | I |
T/R | 0.4405 | ambiguous | 0.549 | ambiguous | -0.333 | Destabilizing | 0.722 | D | 0.542 | neutral | None | None | None | None | I |
T/S | 0.0976 | likely_benign | 0.117 | benign | -0.817 | Destabilizing | 0.016 | N | 0.173 | neutral | N | 0.383791881 | None | None | I |
T/V | 0.3538 | ambiguous | 0.4556 | ambiguous | -0.486 | Destabilizing | 0.038 | N | 0.311 | neutral | None | None | None | None | I |
T/W | 0.8823 | likely_pathogenic | 0.931 | pathogenic | -0.931 | Destabilizing | 0.991 | D | 0.539 | neutral | None | None | None | None | I |
T/Y | 0.5608 | ambiguous | 0.6789 | pathogenic | -0.692 | Destabilizing | 0.901 | D | 0.531 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.