Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23416 | 70471;70472;70473 | chr2:178575886;178575885;178575884 | chr2:179440613;179440612;179440611 |
N2AB | 21775 | 65548;65549;65550 | chr2:178575886;178575885;178575884 | chr2:179440613;179440612;179440611 |
N2A | 20848 | 62767;62768;62769 | chr2:178575886;178575885;178575884 | chr2:179440613;179440612;179440611 |
N2B | 14351 | 43276;43277;43278 | chr2:178575886;178575885;178575884 | chr2:179440613;179440612;179440611 |
Novex-1 | 14476 | 43651;43652;43653 | chr2:178575886;178575885;178575884 | chr2:179440613;179440612;179440611 |
Novex-2 | 14543 | 43852;43853;43854 | chr2:178575886;178575885;178575884 | chr2:179440613;179440612;179440611 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/N | rs762398059 | -1.352 | 0.989 | N | 0.609 | 0.308 | 0.486920840936 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
T/N | rs762398059 | -1.352 | 0.989 | N | 0.609 | 0.308 | 0.486920840936 | gnomAD-4.0.0 | 1.59168E-06 | None | None | None | None | N | None | 0 | 2.28645E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1034 | likely_benign | 0.1072 | benign | -0.977 | Destabilizing | 0.625 | D | 0.51 | neutral | N | 0.498899194 | None | None | N |
T/C | 0.3574 | ambiguous | 0.4049 | ambiguous | -0.778 | Destabilizing | 0.016 | N | 0.333 | neutral | None | None | None | None | N |
T/D | 0.3816 | ambiguous | 0.4192 | ambiguous | -1.227 | Destabilizing | 0.991 | D | 0.637 | neutral | None | None | None | None | N |
T/E | 0.2532 | likely_benign | 0.2959 | benign | -1.129 | Destabilizing | 0.974 | D | 0.634 | neutral | None | None | None | None | N |
T/F | 0.3 | likely_benign | 0.3271 | benign | -0.745 | Destabilizing | 0.949 | D | 0.677 | prob.neutral | None | None | None | None | N |
T/G | 0.3196 | likely_benign | 0.3381 | benign | -1.329 | Destabilizing | 0.915 | D | 0.638 | neutral | None | None | None | None | N |
T/H | 0.2143 | likely_benign | 0.2399 | benign | -1.582 | Destabilizing | 0.998 | D | 0.636 | neutral | None | None | None | None | N |
T/I | 0.1739 | likely_benign | 0.195 | benign | -0.096 | Destabilizing | 0.669 | D | 0.599 | neutral | N | 0.485087353 | None | None | N |
T/K | 0.2543 | likely_benign | 0.2954 | benign | -0.882 | Destabilizing | 0.915 | D | 0.614 | neutral | None | None | None | None | N |
T/L | 0.1245 | likely_benign | 0.1356 | benign | -0.096 | Destabilizing | 0.275 | N | 0.534 | neutral | None | None | None | None | N |
T/M | 0.0847 | likely_benign | 0.0863 | benign | 0.101 | Stabilizing | 0.325 | N | 0.452 | neutral | None | None | None | None | N |
T/N | 0.1145 | likely_benign | 0.1117 | benign | -1.208 | Destabilizing | 0.989 | D | 0.609 | neutral | N | 0.493721407 | None | None | N |
T/P | 0.9123 | likely_pathogenic | 0.9212 | pathogenic | -0.357 | Destabilizing | 0.989 | D | 0.648 | neutral | D | 0.526918177 | None | None | N |
T/Q | 0.1974 | likely_benign | 0.2192 | benign | -1.22 | Destabilizing | 0.974 | D | 0.654 | neutral | None | None | None | None | N |
T/R | 0.2231 | likely_benign | 0.2612 | benign | -0.819 | Destabilizing | 0.974 | D | 0.647 | neutral | None | None | None | None | N |
T/S | 0.1147 | likely_benign | 0.1161 | benign | -1.4 | Destabilizing | 0.891 | D | 0.562 | neutral | N | 0.49116374 | None | None | N |
T/V | 0.1307 | likely_benign | 0.146 | benign | -0.357 | Destabilizing | 0.525 | D | 0.527 | neutral | None | None | None | None | N |
T/W | 0.6682 | likely_pathogenic | 0.6962 | pathogenic | -0.797 | Destabilizing | 0.998 | D | 0.652 | neutral | None | None | None | None | N |
T/Y | 0.3327 | likely_benign | 0.3552 | ambiguous | -0.501 | Destabilizing | 0.974 | D | 0.677 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.