Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23445 | 70558;70559;70560 | chr2:178575799;178575798;178575797 | chr2:179440526;179440525;179440524 |
N2AB | 21804 | 65635;65636;65637 | chr2:178575799;178575798;178575797 | chr2:179440526;179440525;179440524 |
N2A | 20877 | 62854;62855;62856 | chr2:178575799;178575798;178575797 | chr2:179440526;179440525;179440524 |
N2B | 14380 | 43363;43364;43365 | chr2:178575799;178575798;178575797 | chr2:179440526;179440525;179440524 |
Novex-1 | 14505 | 43738;43739;43740 | chr2:178575799;178575798;178575797 | chr2:179440526;179440525;179440524 |
Novex-2 | 14572 | 43939;43940;43941 | chr2:178575799;178575798;178575797 | chr2:179440526;179440525;179440524 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs1216746795 | None | 0.625 | N | 0.335 | 0.17 | 0.162503812791 | gnomAD-4.0.0 | 6.00161E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 6.56251E-06 | 0 | 0 |
T/I | rs750009240 | 0.065 | 0.966 | D | 0.437 | 0.265 | 0.383921772103 | gnomAD-2.1.1 | 1.61E-05 | None | None | None | None | N | None | 0 | 1.15935E-04 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
T/I | rs750009240 | 0.065 | 0.966 | D | 0.437 | 0.265 | 0.383921772103 | gnomAD-4.0.0 | 6.37119E-06 | None | None | None | None | N | None | 0 | 9.14913E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0719 | likely_benign | 0.0754 | benign | -0.79 | Destabilizing | 0.625 | D | 0.335 | neutral | N | 0.511536974 | None | None | N |
T/C | 0.3169 | likely_benign | 0.3173 | benign | -0.374 | Destabilizing | 0.998 | D | 0.415 | neutral | None | None | None | None | N |
T/D | 0.4479 | ambiguous | 0.4691 | ambiguous | -0.564 | Destabilizing | 0.915 | D | 0.417 | neutral | None | None | None | None | N |
T/E | 0.3038 | likely_benign | 0.3339 | benign | -0.535 | Destabilizing | 0.842 | D | 0.416 | neutral | None | None | None | None | N |
T/F | 0.2599 | likely_benign | 0.2701 | benign | -0.728 | Destabilizing | 0.991 | D | 0.507 | neutral | None | None | None | None | N |
T/G | 0.1727 | likely_benign | 0.1731 | benign | -1.091 | Destabilizing | 0.915 | D | 0.44 | neutral | None | None | None | None | N |
T/H | 0.2116 | likely_benign | 0.2156 | benign | -1.404 | Destabilizing | 0.974 | D | 0.485 | neutral | None | None | None | None | N |
T/I | 0.1459 | likely_benign | 0.1508 | benign | -0.068 | Destabilizing | 0.966 | D | 0.437 | neutral | D | 0.523850123 | None | None | N |
T/K | 0.1433 | likely_benign | 0.1626 | benign | -0.921 | Destabilizing | 0.454 | N | 0.416 | neutral | N | 0.425110068 | None | None | N |
T/L | 0.1001 | likely_benign | 0.1017 | benign | -0.068 | Destabilizing | 0.688 | D | 0.417 | neutral | None | None | None | None | N |
T/M | 0.0906 | likely_benign | 0.0907 | benign | 0.229 | Stabilizing | 0.991 | D | 0.43 | neutral | None | None | None | None | N |
T/N | 0.1436 | likely_benign | 0.1508 | benign | -0.924 | Destabilizing | 0.842 | D | 0.335 | neutral | None | None | None | None | N |
T/P | 0.5847 | likely_pathogenic | 0.577 | pathogenic | -0.275 | Destabilizing | 0.989 | D | 0.439 | neutral | N | 0.494592056 | None | None | N |
T/Q | 0.1617 | likely_benign | 0.1696 | benign | -0.984 | Destabilizing | 0.842 | D | 0.417 | neutral | None | None | None | None | N |
T/R | 0.1133 | likely_benign | 0.135 | benign | -0.745 | Destabilizing | 0.002 | N | 0.172 | neutral | N | 0.494220649 | None | None | N |
T/S | 0.0977 | likely_benign | 0.0959 | benign | -1.117 | Destabilizing | 0.625 | D | 0.387 | neutral | N | 0.451947165 | None | None | N |
T/V | 0.1001 | likely_benign | 0.101 | benign | -0.275 | Destabilizing | 0.915 | D | 0.333 | neutral | None | None | None | None | N |
T/W | 0.5754 | likely_pathogenic | 0.566 | pathogenic | -0.758 | Destabilizing | 0.998 | D | 0.521 | neutral | None | None | None | None | N |
T/Y | 0.2973 | likely_benign | 0.3015 | benign | -0.526 | Destabilizing | 0.991 | D | 0.509 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.