Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23446 | 70561;70562;70563 | chr2:178575796;178575795;178575794 | chr2:179440523;179440522;179440521 |
N2AB | 21805 | 65638;65639;65640 | chr2:178575796;178575795;178575794 | chr2:179440523;179440522;179440521 |
N2A | 20878 | 62857;62858;62859 | chr2:178575796;178575795;178575794 | chr2:179440523;179440522;179440521 |
N2B | 14381 | 43366;43367;43368 | chr2:178575796;178575795;178575794 | chr2:179440523;179440522;179440521 |
Novex-1 | 14506 | 43741;43742;43743 | chr2:178575796;178575795;178575794 | chr2:179440523;179440522;179440521 |
Novex-2 | 14573 | 43942;43943;43944 | chr2:178575796;178575795;178575794 | chr2:179440523;179440522;179440521 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | None | None | 0.338 | N | 0.464 | 0.311 | 0.344945010812 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
D/N | rs1290459779 | 0.399 | 0.505 | N | 0.443 | 0.218 | 0.193865811164 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 9.96E-05 | 0 | None | 0 | None | 0 | 0 | 0 |
D/N | rs1290459779 | 0.399 | 0.505 | N | 0.443 | 0.218 | 0.193865811164 | gnomAD-4.0.0 | 1.59285E-06 | None | None | None | None | N | None | 0 | 0 | None | 4.76872E-05 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1107 | likely_benign | 0.1465 | benign | -0.343 | Destabilizing | 0.338 | N | 0.464 | neutral | N | 0.502992061 | None | None | N |
D/C | 0.541 | ambiguous | 0.6114 | pathogenic | 0.085 | Stabilizing | 0.991 | D | 0.653 | neutral | None | None | None | None | N |
D/E | 0.0862 | likely_benign | 0.1018 | benign | -0.335 | Destabilizing | None | N | 0.076 | neutral | N | 0.408215031 | None | None | N |
D/F | 0.5502 | ambiguous | 0.6433 | pathogenic | -0.329 | Destabilizing | 0.967 | D | 0.604 | neutral | None | None | None | None | N |
D/G | 0.1706 | likely_benign | 0.1944 | benign | -0.56 | Destabilizing | 0.505 | D | 0.439 | neutral | N | 0.514459849 | None | None | N |
D/H | 0.2704 | likely_benign | 0.2972 | benign | -0.345 | Destabilizing | 0.879 | D | 0.525 | neutral | N | 0.475878689 | None | None | N |
D/I | 0.3205 | likely_benign | 0.4115 | ambiguous | 0.184 | Stabilizing | 0.906 | D | 0.598 | neutral | None | None | None | None | N |
D/K | 0.3391 | likely_benign | 0.3856 | ambiguous | 0.184 | Stabilizing | 0.404 | N | 0.423 | neutral | None | None | None | None | N |
D/L | 0.3383 | likely_benign | 0.4105 | ambiguous | 0.184 | Stabilizing | 0.826 | D | 0.523 | neutral | None | None | None | None | N |
D/M | 0.4653 | ambiguous | 0.5581 | ambiguous | 0.447 | Stabilizing | 0.991 | D | 0.597 | neutral | None | None | None | None | N |
D/N | 0.0883 | likely_benign | 0.0992 | benign | -0.068 | Destabilizing | 0.505 | D | 0.443 | neutral | N | 0.500490474 | None | None | N |
D/P | 0.9185 | likely_pathogenic | 0.9345 | pathogenic | 0.031 | Stabilizing | 0.906 | D | 0.469 | neutral | None | None | None | None | N |
D/Q | 0.2449 | likely_benign | 0.2755 | benign | -0.028 | Destabilizing | 0.404 | N | 0.444 | neutral | None | None | None | None | N |
D/R | 0.4021 | ambiguous | 0.4463 | ambiguous | 0.293 | Stabilizing | 0.826 | D | 0.5 | neutral | None | None | None | None | N |
D/S | 0.1046 | likely_benign | 0.126 | benign | -0.199 | Destabilizing | 0.404 | N | 0.397 | neutral | None | None | None | None | N |
D/T | 0.1841 | likely_benign | 0.2291 | benign | -0.034 | Destabilizing | 0.575 | D | 0.48 | neutral | None | None | None | None | N |
D/V | 0.1848 | likely_benign | 0.2475 | benign | 0.031 | Stabilizing | 0.782 | D | 0.524 | neutral | N | 0.480371687 | None | None | N |
D/W | 0.8938 | likely_pathogenic | 0.9147 | pathogenic | -0.216 | Destabilizing | 0.991 | D | 0.673 | neutral | None | None | None | None | N |
D/Y | 0.2683 | likely_benign | 0.3242 | benign | -0.104 | Destabilizing | 0.957 | D | 0.608 | neutral | D | 0.522620584 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.