Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23468 | 70627;70628;70629 | chr2:178575730;178575729;178575728 | chr2:179440457;179440456;179440455 |
N2AB | 21827 | 65704;65705;65706 | chr2:178575730;178575729;178575728 | chr2:179440457;179440456;179440455 |
N2A | 20900 | 62923;62924;62925 | chr2:178575730;178575729;178575728 | chr2:179440457;179440456;179440455 |
N2B | 14403 | 43432;43433;43434 | chr2:178575730;178575729;178575728 | chr2:179440457;179440456;179440455 |
Novex-1 | 14528 | 43807;43808;43809 | chr2:178575730;178575729;178575728 | chr2:179440457;179440456;179440455 |
Novex-2 | 14595 | 44008;44009;44010 | chr2:178575730;178575729;178575728 | chr2:179440457;179440456;179440455 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/K | None | None | 0.134 | N | 0.21 | 0.252 | 0.266843984389 | gnomAD-4.0.0 | 1.59179E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85919E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1411 | likely_benign | 0.1308 | benign | -0.645 | Destabilizing | 0.826 | D | 0.374 | neutral | N | 0.481741266 | None | None | I |
T/C | 0.4597 | ambiguous | 0.4366 | ambiguous | -0.259 | Destabilizing | 0.1 | N | 0.238 | neutral | None | None | None | None | I |
T/D | 0.7038 | likely_pathogenic | 0.6714 | pathogenic | -0.514 | Destabilizing | 0.969 | D | 0.379 | neutral | None | None | None | None | I |
T/E | 0.5449 | ambiguous | 0.5124 | ambiguous | -0.535 | Destabilizing | 0.939 | D | 0.347 | neutral | None | None | None | None | I |
T/F | 0.3999 | ambiguous | 0.3729 | ambiguous | -0.727 | Destabilizing | 0.991 | D | 0.42 | neutral | None | None | None | None | I |
T/G | 0.3187 | likely_benign | 0.2981 | benign | -0.889 | Destabilizing | 0.969 | D | 0.366 | neutral | None | None | None | None | I |
T/H | 0.2949 | likely_benign | 0.2878 | benign | -1.214 | Destabilizing | 0.1 | N | 0.28 | neutral | None | None | None | None | I |
T/I | 0.219 | likely_benign | 0.1954 | benign | -0.087 | Destabilizing | 0.988 | D | 0.43 | neutral | N | 0.487622751 | None | None | I |
T/K | 0.2692 | likely_benign | 0.2555 | benign | -0.846 | Destabilizing | 0.134 | N | 0.21 | neutral | N | 0.455144973 | None | None | I |
T/L | 0.1274 | likely_benign | 0.1125 | benign | -0.087 | Destabilizing | 0.939 | D | 0.359 | neutral | None | None | None | None | I |
T/M | 0.1211 | likely_benign | 0.1087 | benign | 0.293 | Stabilizing | 0.997 | D | 0.413 | neutral | None | None | None | None | I |
T/N | 0.1664 | likely_benign | 0.1538 | benign | -0.675 | Destabilizing | 0.939 | D | 0.24 | neutral | None | None | None | None | I |
T/P | 0.686 | likely_pathogenic | 0.6738 | pathogenic | -0.241 | Destabilizing | 0.996 | D | 0.441 | neutral | N | 0.521370044 | None | None | I |
T/Q | 0.2863 | likely_benign | 0.2662 | benign | -0.873 | Destabilizing | 0.982 | D | 0.43 | neutral | None | None | None | None | I |
T/R | 0.2581 | likely_benign | 0.2536 | benign | -0.543 | Destabilizing | 0.035 | N | 0.199 | neutral | N | 0.514923995 | None | None | I |
T/S | 0.1361 | likely_benign | 0.1248 | benign | -0.856 | Destabilizing | 0.826 | D | 0.311 | neutral | N | 0.458838639 | None | None | I |
T/V | 0.1753 | likely_benign | 0.1604 | benign | -0.241 | Destabilizing | 0.939 | D | 0.242 | neutral | None | None | None | None | I |
T/W | 0.7571 | likely_pathogenic | 0.7363 | pathogenic | -0.712 | Destabilizing | 0.999 | D | 0.423 | neutral | None | None | None | None | I |
T/Y | 0.4451 | ambiguous | 0.4179 | ambiguous | -0.499 | Destabilizing | 0.982 | D | 0.44 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.