Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23472 | 70639;70640;70641 | chr2:178575718;178575717;178575716 | chr2:179440445;179440444;179440443 |
N2AB | 21831 | 65716;65717;65718 | chr2:178575718;178575717;178575716 | chr2:179440445;179440444;179440443 |
N2A | 20904 | 62935;62936;62937 | chr2:178575718;178575717;178575716 | chr2:179440445;179440444;179440443 |
N2B | 14407 | 43444;43445;43446 | chr2:178575718;178575717;178575716 | chr2:179440445;179440444;179440443 |
Novex-1 | 14532 | 43819;43820;43821 | chr2:178575718;178575717;178575716 | chr2:179440445;179440444;179440443 |
Novex-2 | 14599 | 44020;44021;44022 | chr2:178575718;178575717;178575716 | chr2:179440445;179440444;179440443 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs556399127 | -0.706 | 0.29 | N | 0.213 | 0.153 | 0.473065174198 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 0 |
V/I | rs556399127 | -0.706 | 0.29 | N | 0.213 | 0.153 | 0.473065174198 | gnomAD-4.0.0 | 3.18349E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77809E-05 | None | 0 | 0 | 2.8591E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.8671 | likely_pathogenic | 0.8889 | pathogenic | -2.408 | Highly Destabilizing | 0.987 | D | 0.602 | neutral | D | 0.552504397 | None | None | N |
V/C | 0.9758 | likely_pathogenic | 0.9839 | pathogenic | -1.981 | Destabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | N |
V/D | 0.9994 | likely_pathogenic | 0.9994 | pathogenic | -3.421 | Highly Destabilizing | 1.0 | D | 0.905 | deleterious | None | None | None | None | N |
V/E | 0.9967 | likely_pathogenic | 0.9971 | pathogenic | -3.109 | Highly Destabilizing | 1.0 | D | 0.875 | deleterious | D | 0.564785755 | None | None | N |
V/F | 0.8923 | likely_pathogenic | 0.9227 | pathogenic | -1.275 | Destabilizing | 1.0 | D | 0.764 | deleterious | None | None | None | None | N |
V/G | 0.9758 | likely_pathogenic | 0.9802 | pathogenic | -3.016 | Highly Destabilizing | 1.0 | D | 0.891 | deleterious | D | 0.564785755 | None | None | N |
V/H | 0.9989 | likely_pathogenic | 0.9992 | pathogenic | -2.907 | Highly Destabilizing | 1.0 | D | 0.885 | deleterious | None | None | None | None | N |
V/I | 0.0733 | likely_benign | 0.0733 | benign | -0.637 | Destabilizing | 0.29 | N | 0.213 | neutral | N | 0.462343091 | None | None | N |
V/K | 0.997 | likely_pathogenic | 0.9975 | pathogenic | -1.966 | Destabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | N |
V/L | 0.4614 | ambiguous | 0.4971 | ambiguous | -0.637 | Destabilizing | 0.853 | D | 0.337 | neutral | N | 0.485422386 | None | None | N |
V/M | 0.6977 | likely_pathogenic | 0.7478 | pathogenic | -0.953 | Destabilizing | 1.0 | D | 0.655 | neutral | None | None | None | None | N |
V/N | 0.9977 | likely_pathogenic | 0.9981 | pathogenic | -2.615 | Highly Destabilizing | 1.0 | D | 0.915 | deleterious | None | None | None | None | N |
V/P | 0.9937 | likely_pathogenic | 0.9947 | pathogenic | -1.209 | Destabilizing | 1.0 | D | 0.879 | deleterious | None | None | None | None | N |
V/Q | 0.9959 | likely_pathogenic | 0.9965 | pathogenic | -2.267 | Highly Destabilizing | 1.0 | D | 0.902 | deleterious | None | None | None | None | N |
V/R | 0.9938 | likely_pathogenic | 0.9944 | pathogenic | -2.031 | Highly Destabilizing | 1.0 | D | 0.917 | deleterious | None | None | None | None | N |
V/S | 0.9841 | likely_pathogenic | 0.9867 | pathogenic | -3.143 | Highly Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | N |
V/T | 0.8869 | likely_pathogenic | 0.9038 | pathogenic | -2.676 | Highly Destabilizing | 1.0 | D | 0.605 | neutral | None | None | None | None | N |
V/W | 0.9982 | likely_pathogenic | 0.9989 | pathogenic | -1.898 | Destabilizing | 1.0 | D | 0.856 | deleterious | None | None | None | None | N |
V/Y | 0.9941 | likely_pathogenic | 0.9963 | pathogenic | -1.587 | Destabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.