Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23493 | 70702;70703;70704 | chr2:178575655;178575654;178575653 | chr2:179440382;179440381;179440380 |
N2AB | 21852 | 65779;65780;65781 | chr2:178575655;178575654;178575653 | chr2:179440382;179440381;179440380 |
N2A | 20925 | 62998;62999;63000 | chr2:178575655;178575654;178575653 | chr2:179440382;179440381;179440380 |
N2B | 14428 | 43507;43508;43509 | chr2:178575655;178575654;178575653 | chr2:179440382;179440381;179440380 |
Novex-1 | 14553 | 43882;43883;43884 | chr2:178575655;178575654;178575653 | chr2:179440382;179440381;179440380 |
Novex-2 | 14620 | 44083;44084;44085 | chr2:178575655;178575654;178575653 | chr2:179440382;179440381;179440380 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 0.815 | N | 0.516 | 0.336 | 0.385906861911 | gnomAD-4.0.0 | 6.00161E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 6.56251E-06 | 0 | 0 |
T/S | rs375675901 | None | 0.004 | N | 0.188 | 0.093 | None | gnomAD-3.1.2 | 2.63E-05 | None | None | None | None | N | None | 9.65E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
T/S | rs375675901 | None | 0.004 | N | 0.188 | 0.093 | None | gnomAD-4.0.0 | 7.43708E-06 | None | None | None | None | N | None | 6.67485E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 5.08613E-06 | 0 | 1.60128E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0914 | likely_benign | 0.091 | benign | -0.906 | Destabilizing | 0.164 | N | 0.296 | neutral | N | 0.507515234 | None | None | N |
T/C | 0.3604 | ambiguous | 0.3811 | ambiguous | -0.415 | Destabilizing | 0.996 | D | 0.511 | neutral | None | None | None | None | N |
T/D | 0.5258 | ambiguous | 0.5829 | pathogenic | -0.897 | Destabilizing | 0.742 | D | 0.438 | neutral | None | None | None | None | N |
T/E | 0.5183 | ambiguous | 0.5509 | ambiguous | -0.788 | Destabilizing | 0.543 | D | 0.434 | neutral | None | None | None | None | N |
T/F | 0.2082 | likely_benign | 0.245 | benign | -0.573 | Destabilizing | 0.984 | D | 0.565 | neutral | None | None | None | None | N |
T/G | 0.2238 | likely_benign | 0.2392 | benign | -1.266 | Destabilizing | 0.373 | N | 0.445 | neutral | None | None | None | None | N |
T/H | 0.2607 | likely_benign | 0.2837 | benign | -1.483 | Destabilizing | 0.953 | D | 0.57 | neutral | None | None | None | None | N |
T/I | 0.18 | likely_benign | 0.1871 | benign | 0.01 | Stabilizing | 0.815 | D | 0.516 | neutral | N | 0.473841228 | None | None | N |
T/K | 0.4287 | ambiguous | 0.4616 | ambiguous | -0.916 | Destabilizing | 0.309 | N | 0.418 | neutral | N | 0.479675271 | None | None | N |
T/L | 0.1086 | likely_benign | 0.1108 | benign | 0.01 | Stabilizing | 0.543 | D | 0.435 | neutral | None | None | None | None | N |
T/M | 0.101 | likely_benign | 0.1076 | benign | 0.144 | Stabilizing | 0.984 | D | 0.518 | neutral | None | None | None | None | N |
T/N | 0.1219 | likely_benign | 0.1389 | benign | -1.137 | Destabilizing | 0.742 | D | 0.417 | neutral | None | None | None | None | N |
T/P | 0.5651 | likely_pathogenic | 0.5473 | ambiguous | -0.264 | Destabilizing | 0.815 | D | 0.485 | neutral | N | 0.518348303 | None | None | N |
T/Q | 0.3116 | likely_benign | 0.3223 | benign | -1.02 | Destabilizing | 0.742 | D | 0.477 | neutral | None | None | None | None | N |
T/R | 0.3455 | ambiguous | 0.3634 | ambiguous | -0.917 | Destabilizing | 0.007 | N | 0.269 | neutral | N | 0.476480251 | None | None | N |
T/S | 0.0744 | likely_benign | 0.0812 | benign | -1.33 | Destabilizing | 0.004 | N | 0.188 | neutral | N | 0.36711777 | None | None | N |
T/V | 0.1482 | likely_benign | 0.1507 | benign | -0.264 | Destabilizing | 0.742 | D | 0.404 | neutral | None | None | None | None | N |
T/W | 0.6142 | likely_pathogenic | 0.6582 | pathogenic | -0.732 | Destabilizing | 0.996 | D | 0.588 | neutral | None | None | None | None | N |
T/Y | 0.2728 | likely_benign | 0.3108 | benign | -0.452 | Destabilizing | 0.984 | D | 0.557 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.