Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23495 | 70708;70709;70710 | chr2:178575649;178575648;178575647 | chr2:179440376;179440375;179440374 |
N2AB | 21854 | 65785;65786;65787 | chr2:178575649;178575648;178575647 | chr2:179440376;179440375;179440374 |
N2A | 20927 | 63004;63005;63006 | chr2:178575649;178575648;178575647 | chr2:179440376;179440375;179440374 |
N2B | 14430 | 43513;43514;43515 | chr2:178575649;178575648;178575647 | chr2:179440376;179440375;179440374 |
Novex-1 | 14555 | 43888;43889;43890 | chr2:178575649;178575648;178575647 | chr2:179440376;179440375;179440374 |
Novex-2 | 14622 | 44089;44090;44091 | chr2:178575649;178575648;178575647 | chr2:179440376;179440375;179440374 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | None | None | 0.87 | N | 0.541 | 0.215 | 0.245101548738 | gnomAD-4.0.0 | 3.18337E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.86607E-05 | 0 |
K/N | rs1482776876 | -0.244 | 0.987 | N | 0.662 | 0.263 | 0.143124449307 | gnomAD-2.1.1 | 2.01E-05 | None | None | None | None | N | None | 6.46E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 3.56E-05 | 0 |
K/N | rs1482776876 | -0.244 | 0.987 | N | 0.662 | 0.263 | 0.143124449307 | gnomAD-4.0.0 | 1.437E-05 | None | None | None | None | N | None | 2.98829E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 1.52924E-05 | 0 | 4.97051E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.556 | ambiguous | 0.6175 | pathogenic | -0.588 | Destabilizing | 0.967 | D | 0.634 | neutral | None | None | None | None | N |
K/C | 0.709 | likely_pathogenic | 0.756 | pathogenic | -0.645 | Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | N |
K/D | 0.8377 | likely_pathogenic | 0.8589 | pathogenic | 0.074 | Stabilizing | 0.995 | D | 0.762 | deleterious | None | None | None | None | N |
K/E | 0.3959 | ambiguous | 0.4275 | ambiguous | 0.171 | Stabilizing | 0.87 | D | 0.541 | neutral | N | 0.505704293 | None | None | N |
K/F | 0.8678 | likely_pathogenic | 0.9027 | pathogenic | -0.421 | Destabilizing | 0.999 | D | 0.734 | prob.delet. | None | None | None | None | N |
K/G | 0.7443 | likely_pathogenic | 0.8002 | pathogenic | -0.923 | Destabilizing | 0.99 | D | 0.701 | prob.neutral | None | None | None | None | N |
K/H | 0.3279 | likely_benign | 0.3424 | ambiguous | -1.245 | Destabilizing | 0.997 | D | 0.737 | prob.delet. | None | None | None | None | N |
K/I | 0.428 | ambiguous | 0.4733 | ambiguous | 0.266 | Stabilizing | 0.823 | D | 0.753 | deleterious | N | 0.473659736 | None | None | N |
K/L | 0.488 | ambiguous | 0.5219 | ambiguous | 0.266 | Stabilizing | 0.753 | D | 0.701 | prob.neutral | None | None | None | None | N |
K/M | 0.3577 | ambiguous | 0.3833 | ambiguous | 0.157 | Stabilizing | 0.997 | D | 0.729 | prob.delet. | None | None | None | None | N |
K/N | 0.7114 | likely_pathogenic | 0.7582 | pathogenic | -0.376 | Destabilizing | 0.987 | D | 0.662 | neutral | N | 0.467734707 | None | None | N |
K/P | 0.844 | likely_pathogenic | 0.8817 | pathogenic | 0.012 | Stabilizing | 0.998 | D | 0.762 | deleterious | None | None | None | None | N |
K/Q | 0.1906 | likely_benign | 0.1999 | benign | -0.468 | Destabilizing | 0.904 | D | 0.649 | neutral | N | 0.504069497 | None | None | N |
K/R | 0.0701 | likely_benign | 0.0731 | benign | -0.484 | Destabilizing | 0.013 | N | 0.245 | neutral | N | 0.443271754 | None | None | N |
K/S | 0.6508 | likely_pathogenic | 0.6984 | pathogenic | -1.079 | Destabilizing | 0.967 | D | 0.602 | neutral | None | None | None | None | N |
K/T | 0.2454 | likely_benign | 0.2639 | benign | -0.774 | Destabilizing | 0.959 | D | 0.751 | deleterious | N | 0.42981688 | None | None | N |
K/V | 0.3836 | ambiguous | 0.4145 | ambiguous | 0.012 | Stabilizing | 0.89 | D | 0.757 | deleterious | None | None | None | None | N |
K/W | 0.7918 | likely_pathogenic | 0.8431 | pathogenic | -0.278 | Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | N |
K/Y | 0.7447 | likely_pathogenic | 0.789 | pathogenic | 0.023 | Stabilizing | 0.968 | D | 0.763 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.